Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1237

Experiment: Varel_Bryant_medium_Glucose; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose; pH 7
1,538,006	-		BT1236	0.44	-1.0
1,538,019	+		BT1236	0.44	-0.0
1,538,041	+		BT1236	0.46	-0.2
1,538,246	+		BT1236	0.57	-0.4
1,538,301	+		BT1236	0.60	-1.6
1,538,302	-		BT1236	0.61	-0.7
1,538,521	+		BT1236	0.73	+0.7
1,538,521	+		BT1236	0.73	+0.1
1,538,522	-		BT1236	0.73	-0.4
1,538,553	-		BT1236	0.75	-1.3
1,538,566	+		BT1236	0.76	+0.7
1,538,662	-		BT1236	0.81	-0.2
1,538,690	+		BT1236	0.83	+1.0
1,538,691	-		BT1236	0.83	-0.1
1,538,773	+		BT1236	0.88	+1.6
1,538,787	+		BT1236	0.88	-0.1
1,538,865	+				+1.6
1,538,968	-				+1.1
1,539,090	+				+1.3
1,539,251	-		BT1237	0.14	-0.1
1,539,298	-		BT1237	0.16	-0.5
1,539,418	+		BT1237	0.22	+0.9
1,539,489	+		BT1237	0.26	-0.0
1,539,489	+		BT1237	0.26	-0.2
1,539,489	+		BT1237	0.26	-0.4
1,539,490	-		BT1237	0.26	-0.1
1,539,490	-		BT1237	0.26	-0.2
1,539,531	+		BT1237	0.28	+0.5
1,539,598	+		BT1237	0.32	-1.3
1,539,619	-		BT1237	0.33	-0.5
1,539,822	+		BT1237	0.43	-1.5
1,539,822	+		BT1237	0.43	-0.3
1,539,823	-		BT1237	0.43	+0.9
1,539,823	-		BT1237	0.43	+0.2
1,539,823	-		BT1237	0.43	-1.8
1,539,824	+		BT1237	0.44	-0.7
1,540,115	+		BT1237	0.59	+0.5
1,540,119	+		BT1237	0.59	-0.1
1,540,119	+		BT1237	0.59	+0.1
1,540,219	-		BT1237	0.64	+0.5
1,540,227	+		BT1237	0.64	-1.0
1,540,317	-		BT1237	0.69	-0.3
1,540,397	+		BT1237	0.73	-2.0
1,540,581	-		BT1237	0.83	-1.0
1,540,722	+				+0.1
1,540,749	-				-0.2
1,540,760	+				-1.3
1,540,812	+				-0.5
1,540,850	-				+0.3
1,540,884	+				-0.0
1,540,898	-				-0.5
1,540,899	+				+1.1
1,540,901	+				-0.5
1,540,901	+				-1.4
1,540,902	-				-0.3
1,540,902	-				-0.6
1,540,912	-				+0.5
1,540,956	+				+0.1
1,540,959	-				+0.6
1,540,987	-				-1.3
1,541,060	+				+0.3
1,541,332	+		BT1238	0.16	-2.1
1,541,639	-		BT1238	0.30	+0.3
1,541,780	+		BT1238	0.36	-0.6
1,541,810	+		BT1238	0.38	+0.5