Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1859

Experiment: Varel_Bryant_medium_Glucose; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose; pH 7
2,331,593	+		BT1858	0.34	-4.8
2,331,599	+		BT1858	0.35	-1.3
2,331,599	+		BT1858	0.35	-4.4
2,331,631	+		BT1858	0.37	-1.5
2,331,825	-		BT1858	0.50	-1.1
2,332,039	+		BT1858	0.64	-0.1
2,332,040	-		BT1858	0.64	-2.8
2,332,044	+		BT1858	0.64	-0.1
2,332,088	+		BT1858	0.67	-2.8
2,332,088	+		BT1858	0.67	-2.0
2,332,089	-		BT1858	0.67	-1.7
2,332,089	-		BT1858	0.67	-1.2
2,332,089	-		BT1858	0.67	-1.5
2,332,091	-		BT1858	0.67	-1.7
2,332,091	-		BT1858	0.67	-2.8
2,332,138	+		BT1858	0.70	-4.0
2,332,138	+		BT1858	0.70	-4.3
2,332,181	-		BT1858	0.73	-2.4
2,332,182	+		BT1858	0.73	-3.9
2,332,182	+		BT1858	0.73	-3.1
2,332,182	+		BT1858	0.73	-0.1
2,332,222	-		BT1858	0.76	-2.6
2,332,229	+		BT1858	0.77	-1.5
2,332,229	+		BT1858	0.77	-1.3
2,332,232	+		BT1858	0.77	-2.6
2,332,296	-		BT1858	0.81	-2.4
2,332,332	+		BT1858	0.83	-5.1
2,332,350	-		BT1858	0.85	-2.2
2,332,588	-				-3.9
2,332,588	-				-3.0
2,332,646	+				-5.0
2,332,724	-		BT1859	0.23	-2.2
2,332,833	+		BT1859	0.41	-4.9
2,332,884	-		BT1859	0.49	-3.9
2,332,884	-		BT1859	0.49	-1.3
2,332,983	+		BT1859	0.66	-5.1
2,332,984	-		BT1859	0.66	-1.3
2,333,032	+		BT1859	0.74	-1.9
2,333,056	+		BT1859	0.78	-2.7
2,333,056	+		BT1859	0.78	-2.5
2,333,110	+		BT1859	0.87	-5.3
2,333,122	+		BT1859	0.89	-0.5
2,333,126	+		BT1859	0.90	-2.6
2,333,127	-		BT1859	0.90	-1.7
2,333,156	-				-1.5
2,333,163	-				-4.9
2,333,206	-				+0.1
2,333,214	-				-0.7
2,333,308	+				-0.9
2,333,309	-				-4.9
2,333,590	+		BT1860	0.26	-3.6
2,333,610	+		BT1860	0.27	-1.5
2,333,610	+		BT1860	0.27	-1.1
2,333,611	-		BT1860	0.27	-1.7
2,333,659	-		BT1860	0.31	-0.9
2,333,711	-		BT1860	0.34	-2.0
2,333,714	-		BT1860	0.35	-2.6
2,333,765	-		BT1860	0.38	-0.5
2,333,936	-		BT1860	0.51	-3.1
2,333,968	+		BT1860	0.53	-1.7
2,333,978	-		BT1860	0.54	-1.9
2,334,021	+		BT1860	0.57	-4.3
2,334,124	+		BT1860	0.64	-4.9
2,334,158	-		BT1860	0.66	-4.2