Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4779

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.25 mg/mL; pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.25 mg/mL; pH 6
6,257,688	-		BT4777	0.55	-2.6
6,257,774	-		BT4777	0.85	-0.4
6,258,032	+		BT4778	0.27	-2.4
6,258,109	+		BT4778	0.36	-1.0
6,258,109	+		BT4778	0.36	-2.0
6,258,314	+		BT4778	0.61	-1.8
6,258,394	-		BT4778	0.70	-0.7
6,258,549	+		BT4778	0.88	-1.6
6,258,597	-				-1.3
6,258,597	-				-1.1
6,258,695	-				-1.1
6,258,767	-		BT4779	0.26	-1.0
6,259,083	+				-2.0
6,259,083	+				+0.4
6,259,101	-				-1.2
6,259,113	-				-1.6
6,259,241	-		BT4780	0.19	-1.0
6,259,383	+		BT4780	0.35	-3.3
6,259,384	-		BT4780	0.35	-0.0
6,259,549	-		BT4780	0.53	-4.1
6,259,592	-		BT4780	0.58	-2.2
6,259,599	-		BT4780	0.59	-1.3
6,259,650	+		BT4780	0.65	-1.8
6,259,674	+		BT4780	0.67	+2.5
6,259,677	-		BT4780	0.68	-2.6
6,259,758	-		BT4780	0.77	+1.5
6,259,758	-		BT4780	0.77	-0.6
6,259,821	-		BT4780	0.84	-1.2
6,259,821	-		BT4780	0.84	-1.8
6,259,967	-				-0.7
6,259,978	+				-2.0
6,259,978	+				-1.7
6,259,979	-				-1.0
6,259,992	+				+2.4