Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09040

Experiment: D-Glucose 120 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09035 and BWI76_RS09040 are separated by 177 nucleotidesBWI76_RS09040 and BWI76_RS09045 are separated by 168 nucleotides BWI76_RS09035: BWI76_RS09035 - protein tyrosine/serine phosphatase, at 1,903,409 to 1,904,191 _RS09035 BWI76_RS09040: BWI76_RS09040 - ABC-F family ATPase, at 1,904,369 to 1,905,961 _RS09040 BWI76_RS09045: BWI76_RS09045 - alpha-glucosidase, at 1,906,130 to 1,908,493 _RS09045 Position (kb) 1904 1905 1906Strain fitness (log2 ratio) -1 0 1at 1903.632 kb on + strand, within BWI76_RS09035at 1903.632 kb on + strand, within BWI76_RS09035at 1903.717 kb on - strand, within BWI76_RS09035at 1903.737 kb on + strand, within BWI76_RS09035at 1903.883 kb on - strand, within BWI76_RS09035at 1904.009 kb on + strand, within BWI76_RS09035at 1904.233 kb on + strandat 1904.339 kb on + strandat 1904.398 kb on + strandat 1904.398 kb on + strandat 1904.610 kb on - strand, within BWI76_RS09040at 1904.649 kb on - strand, within BWI76_RS09040at 1904.812 kb on + strand, within BWI76_RS09040at 1904.852 kb on - strand, within BWI76_RS09040at 1904.946 kb on + strand, within BWI76_RS09040at 1905.721 kb on + strand, within BWI76_RS09040at 1905.940 kb on - strandat 1905.943 kb on + strandat 1905.951 kb on - strandat 1906.042 kb on + strandat 1906.276 kb on - strandat 1906.302 kb on + strandat 1906.397 kb on + strand, within BWI76_RS09045at 1906.699 kb on + strand, within BWI76_RS09045at 1906.737 kb on + strand, within BWI76_RS09045at 1906.794 kb on - strand, within BWI76_RS09045

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 120 mM (C)
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1,903,632 + BWI76_RS09035 0.28 -0.4
1,903,632 + BWI76_RS09035 0.28 +0.1
1,903,717 - BWI76_RS09035 0.39 +0.1
1,903,737 + BWI76_RS09035 0.42 +0.3
1,903,883 - BWI76_RS09035 0.61 -0.3
1,904,009 + BWI76_RS09035 0.77 +0.5
1,904,233 + -0.1
1,904,339 + -0.3
1,904,398 + -0.1
1,904,398 + -1.0
1,904,610 - BWI76_RS09040 0.15 -0.4
1,904,649 - BWI76_RS09040 0.18 -1.2
1,904,812 + BWI76_RS09040 0.28 -1.6
1,904,852 - BWI76_RS09040 0.30 -0.5
1,904,946 + BWI76_RS09040 0.36 -0.5
1,905,721 + BWI76_RS09040 0.85 -0.0
1,905,940 - +0.7
1,905,943 + +0.8
1,905,951 - +0.0
1,906,042 + -0.4
1,906,276 - +0.6
1,906,302 + +0.3
1,906,397 + BWI76_RS09045 0.11 +0.2
1,906,699 + BWI76_RS09045 0.24 +0.3
1,906,737 + BWI76_RS09045 0.26 -0.1
1,906,794 - BWI76_RS09045 0.28 -0.4

Or see this region's nucleotide sequence