Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1716

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
2,111,282	+		BT1714	0.78	-0.3
2,111,315	-		BT1714	0.81	-1.2
2,111,417	-				-1.5
2,111,512	+				+0.1
2,111,554	+				-1.0
2,111,658	+		BT1715	0.20	-0.0
2,111,663	+		BT1715	0.20	-0.3
2,111,762	+		BT1715	0.33	+0.1
2,111,943	+		BT1715	0.58	-0.7
2,111,979	+		BT1715	0.62	-0.4
2,111,981	+		BT1715	0.63	-2.0
2,111,988	+		BT1715	0.64	-1.4
2,112,057	+		BT1715	0.73	+1.3
2,112,152	+		BT1715	0.85	-0.7
2,112,187	+				-0.7
2,112,512	+		BT1716	0.19	+0.7
2,112,554	+		BT1716	0.23	+0.3
2,112,597	+		BT1716	0.26	+0.4
2,112,612	+		BT1716	0.27	-2.2
2,112,644	+		BT1716	0.30	-1.5
2,112,683	+		BT1716	0.33	-3.4
2,112,775	+		BT1716	0.40	+0.9
2,113,021	+		BT1716	0.60	-0.7
2,113,059	+		BT1716	0.63	-1.4
2,113,078	+		BT1716	0.64	+0.4
2,113,079	-		BT1716	0.64	+4.4
2,113,079	-		BT1716	0.64	+1.3
2,113,156	+		BT1716	0.70	-0.4
2,113,192	+		BT1716	0.73	-0.5
2,113,249	+		BT1716	0.78	+0.1
2,113,275	+		BT1716	0.80	-0.9
2,113,280	-		BT1716	0.80	+1.2
2,113,404	-				+2.5
2,113,432	+				-1.4
2,113,604	+				-1.5
2,113,625	+				-0.9
2,113,625	+				-0.4
2,113,644	+		BT1717	0.11	+0.4
2,113,649	+		BT1717	0.11	+0.9
2,113,730	+		BT1717	0.17	-1.9
2,113,774	+		BT1717	0.20	+0.9
2,113,774	+		BT1717	0.20	-1.0
2,113,774	+		BT1717	0.20	-1.4
2,113,774	+		BT1717	0.20	-0.7
2,113,808	+		BT1717	0.22	-0.0
2,113,980	+		BT1717	0.34	-0.1
2,113,980	+		BT1717	0.34	+1.4
2,113,983	+		BT1717	0.34	-1.6
2,114,039	+		BT1717	0.38	-1.4
2,114,070	+		BT1717	0.40	+0.3
2,114,086	+		BT1717	0.41	-2.8
2,114,114	-		BT1717	0.43	+1.9
2,114,231	+		BT1717	0.50	+0.1
2,114,232	-		BT1717	0.51	-0.4
2,114,271	+		BT1717	0.53	-0.1
2,114,289	-		BT1717	0.54	+0.3
2,114,291	+		BT1717	0.54	-1.4
2,114,296	-		BT1717	0.55	-1.3
2,114,322	+		BT1717	0.57	-0.3
2,114,502	+		BT1717	0.69	+1.2
2,114,517	+		BT1717	0.70	+0.0