Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1203

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
1,497,190	+		BT1201	0.41	-1.2
1,497,193	+		BT1201	0.41	-1.0
1,497,302	-		BT1201	0.59	+0.6
1,497,452	+		BT1201	0.82	+1.3
1,497,565	-				-1.7
1,497,572	-				+0.9
1,497,973	+		BT1202	0.69	-1.3
1,498,064	+		BT1202	0.88	+0.9
1,498,151	+				-0.0
1,498,155	-				+0.0
1,498,216	-		BT1203	0.18	+2.2
1,498,353	+		BT1203	0.40	-1.3
1,498,370	+		BT1203	0.43	-0.8
1,498,371	-		BT1203	0.43	-0.5
1,498,401	+		BT1203	0.48	-1.6
1,498,514	-		BT1203	0.66	+0.3
1,498,986	-				-1.9
1,499,047	-				-1.4
1,499,049	-				-1.3