Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2407

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
3,004,878	+		BT2406	0.47	+0.2
3,004,930	+		BT2406	0.51	+0.5
3,004,961	+		BT2406	0.53	-3.9
3,004,961	+		BT2406	0.53	+0.4
3,004,963	+		BT2406	0.53	-1.8
3,004,967	+		BT2406	0.54	-0.4
3,004,972	+		BT2406	0.54	-0.2
3,005,020	+		BT2406	0.57	+0.1
3,005,169	+		BT2406	0.68	+1.2
3,005,183	+		BT2406	0.69	-1.6
3,005,233	+		BT2406	0.73	+0.0
3,005,233	+		BT2406	0.73	+0.1
3,005,233	+		BT2406	0.73	-0.4
3,005,233	+		BT2406	0.73	+0.1
3,005,262	+		BT2406	0.75	-0.3
3,005,401	+		BT2406	0.85	-1.8
3,005,506	+				-2.4
3,005,506	+				-1.6
3,005,553	+				-0.1
3,005,571	+				+0.2
3,005,616	+				-1.0
3,005,693	+				-0.5
3,005,697	+				+0.1
3,005,803	+		BT2407	0.11	+0.2
3,005,844	+		BT2407	0.13	+0.7
3,005,846	+		BT2407	0.14	-0.9
3,005,848	+		BT2407	0.14	+1.7
3,005,882	+		BT2407	0.16	+1.7
3,005,918	+		BT2407	0.18	+0.1
3,006,219	+		BT2407	0.36	-2.3
3,006,564	+		BT2407	0.57	+1.1
3,006,573	+		BT2407	0.58	-1.3
3,006,626	+		BT2407	0.61	-0.7
3,006,669	+		BT2407	0.63	+2.1
3,006,777	+		BT2407	0.70	-1.8
3,006,906	+		BT2407	0.78	-2.6
3,006,906	+		BT2407	0.78	-2.3
3,007,008	+		BT2407	0.84	+2.7
3,007,008	+		BT2407	0.84	+0.9
3,007,254	+				-0.7
3,007,913	+				-0.3