Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2293

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
2,867,660	+				-3.1
2,867,660	+				-1.1
2,867,694	+		BT2291	0.23	-0.5
2,867,696	+		BT2291	0.24	-2.7
2,867,696	+		BT2291	0.24	-1.8
2,867,697	-		BT2291	0.24	-2.9
2,867,697	-		BT2291	0.24	-2.7
2,867,699	+		BT2291	0.24	-2.8
2,867,719	+		BT2291	0.31	-1.1
2,867,738	+		BT2291	0.36	-1.5
2,867,782	+		BT2291	0.50	-2.1
2,867,805	+		BT2291	0.57	-1.4
2,867,856	+		BT2291	0.72	-3.2
2,867,917	+				+1.2
2,868,127	+		BT2292	0.26	-0.7
2,868,142	+		BT2292	0.29	-2.8
2,868,220	+		BT2292	0.41	-1.3
2,868,248	-		BT2292	0.46	-1.1
2,868,411	+		BT2292	0.72	-1.1
2,868,490	+		BT2292	0.84	-1.0
2,868,563	+				-2.4
2,868,804	+		BT2293	0.19	-2.2
2,868,930	+		BT2293	0.32	-1.0
2,868,930	+		BT2293	0.32	-1.3
2,868,940	+		BT2293	0.33	-0.9
2,868,940	+		BT2293	0.33	-1.7
2,868,942	+		BT2293	0.33	-1.2
2,868,943	-		BT2293	0.33	+0.1
2,868,943	-		BT2293	0.33	-1.8
2,868,964	+		BT2293	0.35	-1.0
2,869,132	-		BT2293	0.52	-1.7
2,869,212	+		BT2293	0.60	-1.8
2,869,213	-		BT2293	0.60	-1.1
2,869,293	+		BT2293	0.68	-2.3
2,869,360	+		BT2293	0.74	+0.3
2,869,369	+		BT2293	0.75	-2.6
2,869,491	+		BT2293	0.87	-1.7
2,869,613	+				-2.7
2,869,912	+		BT2294	0.46	-1.6
2,869,912	+		BT2294	0.46	-2.0
2,869,912	+		BT2294	0.46	-1.0
2,869,951	+		BT2294	0.53	-1.7
2,870,042	-		BT2294	0.67	-2.7
2,870,139	-		BT2294	0.82	-1.1
2,870,201	+				-0.2
2,870,345	+				-0.7
2,870,349	+				-2.0
2,870,352	-				-1.1
2,870,481	+		BT2295	0.56	+0.1
2,870,499	+		BT2295	0.63	-1.9
2,870,503	+		BT2295	0.64	-2.7
2,870,571	+		BT2295	0.89	+0.7
2,870,587	+				-1.7
2,870,612	+				-1.6