Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1681

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
2,072,200	-				-1.5
2,072,212	-				-4.2
2,072,470	-		BT1680	0.44	-2.5
2,072,487	-		BT1680	0.47	-0.7
2,072,640	-		BT1680	0.75	-1.9
2,072,646	-		BT1680	0.77	-0.9
2,072,646	-		BT1680	0.77	-1.2
2,072,707	-		BT1680	0.88	-2.2
2,072,796	-				-1.8
2,072,796	-				+0.7
2,072,796	-				-0.9
2,072,800	-				-0.9
2,072,826	-				-1.9
2,072,844	-				-0.7
2,072,844	-				-3.2
2,072,861	+				+0.2
2,072,870	+				-0.6
2,072,964	+				+2.4
2,072,992	+				-1.9
2,072,993	-				-2.5
2,073,077	-				+0.3
2,073,078	-				+0.0
2,073,137	-				-0.5
2,073,150	+				-3.1
2,073,173	+				-0.9
2,073,206	+				-0.4
2,073,409	+		BT1681	0.44	-2.0
2,073,447	-		BT1681	0.51	-3.2
2,073,447	-		BT1681	0.51	-1.6
2,073,461	+		BT1681	0.54	-1.6
2,073,582	-		BT1681	0.76	-0.7
2,073,604	+		BT1681	0.80	+0.8
2,073,636	+		BT1681	0.86	-0.9
2,073,649	+		BT1681	0.88	-0.9
2,073,651	+		BT1681	0.89	-1.2
2,073,652	-		BT1681	0.89	-2.6
2,073,658	+				-2.0
2,073,658	+				-0.4
2,073,718	+				+1.9
2,073,719	-				-2.1
2,073,751	-				-2.2
2,073,818	-				-1.2
2,073,900	+				-0.5
2,073,904	-				-1.5
2,073,959	-				-1.5
2,074,012	+				-1.6
2,074,013	-				-0.9
2,074,045	+				-0.7
2,074,046	-				-1.8
2,074,171	+		BT1682	0.14	-0.9
2,074,175	-		BT1682	0.14	+1.1
2,074,176	+		BT1682	0.14	+0.6
2,074,205	+		BT1682	0.16	+0.6
2,074,206	-		BT1682	0.16	-0.9
2,074,231	-		BT1682	0.17	-0.8
2,074,337	-		BT1682	0.22	-0.2
2,074,374	+		BT1682	0.24	-2.0
2,074,480	-		BT1682	0.30	-1.5
2,074,480	-		BT1682	0.30	-1.8
2,074,538	-		BT1682	0.33	-1.8
2,074,538	-		BT1682	0.33	-2.4
2,074,607	-		BT1682	0.36	-2.1
2,074,607	-		BT1682	0.36	-1.2
2,074,658	-		BT1682	0.39	+0.0
2,074,661	+		BT1682	0.39	+0.2
2,074,662	-		BT1682	0.39	-1.4
2,074,662	-		BT1682	0.39	+1.9
2,074,663	+		BT1682	0.39	+0.1
2,074,664	-		BT1682	0.39	-0.9
2,074,666	+		BT1682	0.39	+0.1
2,074,688	-		BT1682	0.40	-0.6
2,074,690	+		BT1682	0.40	-0.3