Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1679

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
2,072,120	-		BT1679	0.66	-2.5
2,072,143	-		BT1679	0.73	-1.2
2,072,200	-				-1.5
2,072,212	-				-4.2
2,072,470	-		BT1680	0.44	-2.5
2,072,487	-		BT1680	0.47	-0.7
2,072,640	-		BT1680	0.75	-1.9
2,072,646	-		BT1680	0.77	-0.9
2,072,646	-		BT1680	0.77	-1.2
2,072,707	-		BT1680	0.88	-2.2
2,072,796	-				-1.8
2,072,796	-				+0.7
2,072,796	-				-0.9
2,072,800	-				-0.9
2,072,826	-				-1.9
2,072,844	-				-0.7
2,072,844	-				-3.2
2,072,861	+				+0.2
2,072,870	+				-0.6
2,072,964	+				+2.4
2,072,992	+				-1.9
2,072,993	-				-2.5
2,073,077	-				+0.3
2,073,078	-				+0.0
2,073,137	-				-0.5
2,073,150	+				-3.1
2,073,173	+				-0.9
2,073,206	+				-0.4