Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1516

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
1,871,773	-				-1.1
1,871,806	+				+1.9
1,871,811	-				-2.2
1,871,888	-				-0.7
1,871,916	+				-5.3
1,871,921	+				-0.3
1,871,958	+				-1.6
1,871,997	-		BT1515	0.12	+0.3
1,871,999	-		BT1515	0.12	-2.4
1,872,251	+		BT1515	0.51	-1.5
1,872,549	+				-0.4
1,872,550	-				-1.6
1,872,673	+				-1.2
1,872,719	-		BT1516	0.13	-0.4
1,872,830	+		BT1516	0.21	-0.1
1,872,831	-		BT1516	0.21	-2.5
1,872,903	-		BT1516	0.26	-0.7
1,872,950	+		BT1516	0.29	-1.8
1,873,088	+		BT1516	0.39	-2.0
1,873,258	+		BT1516	0.52	-1.1
1,873,415	+		BT1516	0.63	-0.9
1,873,724	+		BT1516	0.85	-0.7
1,873,727	+		BT1516	0.85	-2.9
1,873,727	+		BT1516	0.85	-0.7
1,873,728	-		BT1516	0.85	-0.8
1,873,908	-				-1.2
1,874,145	-				-1.2
1,874,148	+				-1.8
1,874,177	+		BT1517	0.13	-1.9
1,874,518	-		BT1517	0.77	-0.7
1,874,713	-				-1.8
1,874,929	-				-1.4