Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1321

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
1,645,417	-				-0.6
1,645,476	+				-0.4
1,645,580	+				+1.1
1,645,611	-		BT1320	0.13	+0.9
1,645,614	-		BT1320	0.13	-1.5
1,645,668	-		BT1320	0.21	-2.1
1,645,668	-		BT1320	0.21	+1.2
1,645,728	-		BT1320	0.30	+0.6
1,645,728	-		BT1320	0.30	-1.1
1,645,914	-		BT1320	0.57	-0.1
1,645,914	-		BT1320	0.57	+0.2
1,646,022	+		BT1320	0.73	-0.2
1,646,023	-		BT1320	0.73	-1.2
1,646,023	-		BT1320	0.73	+0.3
1,646,184	-				-1.4
1,646,224	-				-2.5
1,646,236	+				-0.4
1,646,291	-				+1.9
1,646,337	-				-2.2
1,646,425	-		BT1321	0.21	-0.7
1,646,435	-		BT1321	0.22	-2.4
1,646,478	-		BT1321	0.28	-0.4
1,646,532	+		BT1321	0.35	+0.2
1,646,709	+		BT1321	0.58	-0.6
1,646,724	-		BT1321	0.60	-0.3
1,646,807	+		BT1321	0.71	-1.4
1,646,808	-		BT1321	0.71	-0.7
1,646,810	+		BT1321	0.71	-0.2
1,646,984	-				-0.9
1,647,026	+				+0.8
1,647,131	+		BT1322	0.11	+0.7
1,647,132	-		BT1322	0.11	+2.1
1,647,132	-		BT1322	0.11	+0.4
1,647,142	+		BT1322	0.12	-2.6
1,647,142	+		BT1322	0.12	-0.1
1,647,183	-		BT1322	0.17	-2.1
1,647,204	+		BT1322	0.19	+1.8
1,647,245	+		BT1322	0.24	-0.4
1,647,307	+		BT1322	0.31	-1.9
1,647,790	+		BT1322	0.86	-3.6
1,647,792	+		BT1322	0.87	-0.8
1,647,829	-				-0.9
1,647,894	+				-2.8
1,647,920	-				-0.4
1,647,945	+				-0.9
1,647,945	+				-0.9
1,647,968	+				-1.3
1,647,968	+				-1.1
1,647,986	+				-1.4