Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1084

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
1,368,951	+		BT1082	0.80	-0.5
1,368,966	+		BT1082	0.82	-0.9
1,368,973	-		BT1082	0.82	+0.3
1,369,093	+				-1.2
1,369,229	+				-1.1
1,369,232	+				-0.7
1,369,266	+				-2.1
1,369,266	+				-1.1
1,369,271	+				-0.6
1,369,293	+				-0.4
1,369,296	+				-2.0
1,369,296	+				-2.7
1,369,917	-				-1.0
1,369,917	-				-0.3
1,370,063	-		BT1084	0.19	-1.7
1,370,105	+		BT1084	0.26	-0.7
1,370,116	-		BT1084	0.28	-2.6
1,370,313	+		BT1084	0.61	-1.0
1,370,347	+		BT1084	0.67	-3.6
1,370,509	-				-0.9
1,370,545	-				-1.1
1,370,553	-				-1.9
1,370,650	-				-2.3
1,370,654	+				+0.7
1,370,655	-				-1.3
1,370,657	-				-1.1
1,370,659	-				-0.6
1,370,665	-				+2.4
1,370,733	+				-1.3
1,370,827	-				-2.0
1,370,856	+				-0.1
1,370,884	-				+0.3
1,370,914	+				+1.8
1,370,915	-				-2.6
1,371,221	-				-1.7
1,371,285	+		BT1085	0.11	+0.5
1,371,397	+		BT1085	0.39	-1.8
1,371,400	+		BT1085	0.40	+0.1
1,371,516	-		BT1085	0.69	-1.3