Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1048

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
1,328,509	-		BT1047	0.38	+1.1
1,328,522	+		BT1047	0.39	+0.1
1,328,523	-		BT1047	0.39	+3.1
1,328,582	-		BT1047	0.43	-0.5
1,328,657	-		BT1047	0.48	-0.4
1,328,757	-		BT1047	0.54	-1.8
1,328,783	-		BT1047	0.56	-2.7
1,328,792	+		BT1047	0.57	-0.7
1,328,831	+		BT1047	0.59	+1.1
1,328,832	-		BT1047	0.59	-2.2
1,329,381	-				+0.8
1,329,605	+		BT1048	0.11	+1.5
1,329,608	+		BT1048	0.11	-1.0
1,329,804	+		BT1048	0.28	-0.0
1,329,833	-		BT1048	0.31	-3.2
1,329,873	+		BT1048	0.34	-2.1
1,329,873	+		BT1048	0.34	-1.9
1,329,876	-		BT1048	0.35	-1.1
1,330,070	-		BT1048	0.52	-0.2
1,330,162	-		BT1048	0.60	+1.2
1,330,232	-		BT1048	0.66	+0.7
1,330,389	+		BT1048	0.80	-0.7
1,330,400	-		BT1048	0.81	-1.1
1,330,421	-		BT1048	0.83	-0.2
1,330,511	+				-0.2
1,330,704	-				-0.7
1,330,705	+				-2.4
1,330,706	-				-0.7
1,330,820	-		BT1049	0.17	+1.5
1,330,925	+		BT1049	0.26	+0.7
1,330,945	+		BT1049	0.28	-1.7
1,330,946	-		BT1049	0.28	+1.4
1,331,034	-		BT1049	0.35	-0.3
1,331,041	-		BT1049	0.36	-0.3
1,331,079	+		BT1049	0.39	-0.3
1,331,080	-		BT1049	0.39	-0.9
1,331,116	+		BT1049	0.42	+1.1
1,331,240	-		BT1049	0.53	-0.7
1,331,329	+		BT1049	0.60	+0.1
1,331,353	-		BT1049	0.62	-0.8
1,331,410	+		BT1049	0.67	-2.6
1,331,411	-		BT1049	0.67	-1.8
1,331,455	+		BT1049	0.71	-0.9
1,331,460	-		BT1049	0.71	-1.4
1,331,462	-		BT1049	0.71	-0.5
1,331,462	-		BT1049	0.71	+2.1
1,331,510	-		BT1049	0.75	+0.1
1,331,522	-		BT1049	0.76	-0.2
1,331,543	-		BT1049	0.78	-0.2