Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0985

Experiment: Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
1,210,060	+		BT0984	0.61	-1.0
1,210,187	-		BT0984	0.67	+0.5
1,210,264	+		BT0984	0.70	+2.1
1,210,264	+		BT0984	0.70	-1.6
1,210,265	-		BT0984	0.70	-0.7
1,210,282	+		BT0984	0.71	-0.8
1,210,332	+		BT0984	0.73	-1.3
1,210,513	-		BT0984	0.80	-1.8
1,210,514	+		BT0984	0.80	-2.2
1,210,515	-		BT0984	0.80	+0.9
1,210,605	+		BT0984	0.84	-0.5
1,210,615	+		BT0984	0.84	+0.8
1,210,621	+		BT0984	0.85	-1.2
1,210,655	-		BT0984	0.86	-0.9
1,210,823	-				+3.7
1,210,825	+				-2.0
1,211,004	-				-1.5
1,211,050	+				-0.0
1,211,160	-		BT0985	0.11	+0.5
1,211,511	+		BT0985	0.35	-0.9
1,211,531	-		BT0985	0.37	-2.3
1,211,543	+		BT0985	0.38	-3.8
1,211,612	+		BT0985	0.43	-1.2
1,211,702	+		BT0985	0.49	-2.6
1,211,980	+		BT0985	0.68	-0.5
1,212,162	+		BT0985	0.81	+0.5
1,212,265	+		BT0985	0.88	-1.9
1,212,342	+				-0.9
1,212,685	-				-0.2
1,212,738	+				-0.5
1,212,785	+		BT0986	0.10	-1.0
1,213,026	+		BT0986	0.18	-1.2
1,213,136	+		BT0986	0.21	-0.2
1,213,146	-		BT0986	0.21	-0.5
1,213,258	+		BT0986	0.25	+0.9
1,213,258	+		BT0986	0.25	-1.0
1,213,258	+		BT0986	0.25	+1.3
1,213,280	+		BT0986	0.25	-1.2
1,213,395	+		BT0986	0.29	-0.9