Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0706 and Psest_0707 overlap by 11 nucleotides Psest_0707 and Psest_0708 are separated by 112 nucleotides
Psest_0706: Psest_0706 - His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 775,355 to 776,947
_0706
Psest_0707: Psest_0707 - MYND finger., at 776,937 to 777,170
_0707
Psest_0708: Psest_0708 - outer membrane assembly lipoprotein YfiO, at 777,283 to 778,272
_0708
Position (kb) 776
777
778 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 776.490 kb on + strand, within Psest_0706 at 776.491 kb on - strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.526 kb on + strand, within Psest_0706 at 776.527 kb on - strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.538 kb on + strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.539 kb on - strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.664 kb on + strand, within Psest_0706 at 776.772 kb on + strand, within Psest_0706 at 776.772 kb on + strand, within Psest_0706 at 776.889 kb on + strand at 776.890 kb on - strand at 776.986 kb on + strand, within Psest_0707 at 777.024 kb on + strand, within Psest_0707 at 777.024 kb on + strand, within Psest_0707 at 777.024 kb on + strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.025 kb on - strand, within Psest_0707 at 777.030 kb on + strand, within Psest_0707 at 777.252 kb on + strand at 777.252 kb on + strand at 777.252 kb on + strand at 777.252 kb on + strand at 777.252 kb on + strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.253 kb on - strand at 777.343 kb on + strand at 777.409 kb on + strand, within Psest_0708 at 777.555 kb on - strand, within Psest_0708 at 777.555 kb on - strand, within Psest_0708
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 776,490 + Psest_0706 0.71 +1.0 776,491 - Psest_0706 0.71 +1.4 776,526 + Psest_0706 0.74 +1.5 776,526 + Psest_0706 0.74 +1.8 776,526 + Psest_0706 0.74 +2.6 776,526 + Psest_0706 0.74 -1.2 776,526 + Psest_0706 0.74 +1.7 776,526 + Psest_0706 0.74 +1.8 776,527 - Psest_0706 0.74 -0.3 776,538 + Psest_0706 0.74 +1.4 776,538 + Psest_0706 0.74 +1.7 776,538 + Psest_0706 0.74 +1.8 776,538 + Psest_0706 0.74 +2.1 776,538 + Psest_0706 0.74 +1.4 776,538 + Psest_0706 0.74 +2.6 776,539 - Psest_0706 0.74 +1.2 776,539 - Psest_0706 0.74 +1.7 776,539 - Psest_0706 0.74 +1.3 776,539 - Psest_0706 0.74 +0.1 776,539 - Psest_0706 0.74 +2.4 776,664 + Psest_0706 0.82 +1.0 776,664 + Psest_0706 0.82 +2.4 776,664 + Psest_0706 0.82 +1.8 776,664 + Psest_0706 0.82 +3.4 776,664 + Psest_0706 0.82 +1.8 776,772 + Psest_0706 0.89 +1.5 776,772 + Psest_0706 0.89 +1.9 776,889 + +3.4 776,890 - +1.9 776,986 + Psest_0707 0.21 +1.7 777,024 + Psest_0707 0.37 +1.3 777,024 + Psest_0707 0.37 +0.8 777,024 + Psest_0707 0.37 +0.7 777,025 - Psest_0707 0.38 +0.5 777,025 - Psest_0707 0.38 +0.9 777,025 - Psest_0707 0.38 +0.5 777,025 - Psest_0707 0.38 +1.6 777,025 - Psest_0707 0.38 +0.6 777,025 - Psest_0707 0.38 +0.5 777,025 - Psest_0707 0.38 +0.7 777,025 - Psest_0707 0.38 +0.1 777,025 - Psest_0707 0.38 +0.9 777,025 - Psest_0707 0.38 +0.8 777,030 + Psest_0707 0.40 +1.0 777,252 + +1.6 777,252 + +0.6 777,252 + +0.0 777,252 + +2.1 777,252 + +0.6 777,253 - +0.5 777,253 - -0.6 777,253 - +0.6 777,253 - -0.4 777,253 - -2.4 777,253 - +0.5 777,253 - -0.4 777,253 - -0.0 777,253 - +0.6 777,253 - -0.1 777,253 - +0.8 777,253 - +0.2 777,343 + -0.4 777,409 + Psest_0708 0.13 +2.4 777,555 - Psest_0708 0.27 +0.4 777,555 - Psest_0708 0.27 +0.3
Or see this region's nucleotide sequence