Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2589 and Psest_2590 are separated by 95 nucleotides Psest_2590 and Psest_2591 are separated by 11 nucleotides
Psest_2589: Psest_2589 - 3-isopropylmalate dehydrogenase, at 2,771,214 to 2,772,296
_2589
Psest_2590: Psest_2590 - 3-isopropylmalate dehydratase, small subunit, at 2,772,392 to 2,773,039
_2590
Psest_2591: Psest_2591 - 3-isopropylmalate dehydratase, large subunit, at 2,773,051 to 2,774,478
_2591
Position (kb)
2772
2773
2774 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2771.467 kb on + strand, within Psest_2589 at 2771.468 kb on - strand, within Psest_2589 at 2771.468 kb on - strand, within Psest_2589 at 2771.632 kb on + strand, within Psest_2589 at 2771.632 kb on + strand, within Psest_2589 at 2771.632 kb on + strand, within Psest_2589 at 2771.632 kb on + strand, within Psest_2589 at 2771.632 kb on + strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.633 kb on - strand, within Psest_2589 at 2771.663 kb on - strand, within Psest_2589 at 2771.663 kb on - strand, within Psest_2589 at 2771.663 kb on - strand, within Psest_2589 at 2771.663 kb on - strand, within Psest_2589 at 2771.663 kb on - strand, within Psest_2589 at 2771.822 kb on - strand, within Psest_2589 at 2771.875 kb on + strand, within Psest_2589 at 2771.876 kb on - strand, within Psest_2589 at 2771.876 kb on - strand, within Psest_2589 at 2772.146 kb on - strand, within Psest_2589 at 2772.390 kb on + strand at 2772.391 kb on - strand at 2772.691 kb on - strand, within Psest_2590 at 2773.072 kb on + strand at 2773.072 kb on + strand at 2773.072 kb on + strand at 2773.073 kb on - strand at 2773.073 kb on - strand at 2773.430 kb on - strand, within Psest_2591 at 2773.430 kb on - strand, within Psest_2591 at 2773.430 kb on - strand, within Psest_2591 at 2773.487 kb on + strand, within Psest_2591 at 2773.488 kb on - strand, within Psest_2591 at 2773.488 kb on - strand, within Psest_2591
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,771,467 + Psest_2589 0.23 -3.1 2,771,468 - Psest_2589 0.23 -2.8 2,771,468 - Psest_2589 0.23 -3.2 2,771,632 + Psest_2589 0.39 -1.2 2,771,632 + Psest_2589 0.39 -2.1 2,771,632 + Psest_2589 0.39 -0.1 2,771,632 + Psest_2589 0.39 -3.2 2,771,632 + Psest_2589 0.39 -2.8 2,771,633 - Psest_2589 0.39 -4.9 2,771,633 - Psest_2589 0.39 -2.6 2,771,633 - Psest_2589 0.39 -1.1 2,771,633 - Psest_2589 0.39 -5.4 2,771,633 - Psest_2589 0.39 -4.0 2,771,633 - Psest_2589 0.39 -1.5 2,771,633 - Psest_2589 0.39 -1.8 2,771,633 - Psest_2589 0.39 -4.5 2,771,633 - Psest_2589 0.39 -2.5 2,771,633 - Psest_2589 0.39 -4.1 2,771,633 - Psest_2589 0.39 -3.0 2,771,633 - Psest_2589 0.39 -2.7 2,771,633 - Psest_2589 0.39 -2.9 2,771,633 - Psest_2589 0.39 -2.2 2,771,633 - Psest_2589 0.39 -4.2 2,771,633 - Psest_2589 0.39 -5.0 2,771,633 - Psest_2589 0.39 -3.4 2,771,633 - Psest_2589 0.39 -1.5 2,771,633 - Psest_2589 0.39 -2.0 2,771,633 - Psest_2589 0.39 -3.1 2,771,633 - Psest_2589 0.39 -2.2 2,771,633 - Psest_2589 0.39 -5.3 2,771,633 - Psest_2589 0.39 -3.3 2,771,633 - Psest_2589 0.39 -3.2 2,771,633 - Psest_2589 0.39 -3.9 2,771,633 - Psest_2589 0.39 -4.4 2,771,633 - Psest_2589 0.39 -2.5 2,771,633 - Psest_2589 0.39 -3.4 2,771,633 - Psest_2589 0.39 -1.7 2,771,633 - Psest_2589 0.39 -0.7 2,771,663 - Psest_2589 0.41 -2.1 2,771,663 - Psest_2589 0.41 -1.2 2,771,663 - Psest_2589 0.41 -1.8 2,771,663 - Psest_2589 0.41 -3.7 2,771,663 - Psest_2589 0.41 -3.5 2,771,822 - Psest_2589 0.56 -2.6 2,771,875 + Psest_2589 0.61 -5.8 2,771,876 - Psest_2589 0.61 -0.3 2,771,876 - Psest_2589 0.61 -2.7 2,772,146 - Psest_2589 0.86 -1.4 2,772,390 + -4.0 2,772,391 - -0.1 2,772,691 - Psest_2590 0.46 -4.8 2,773,072 + -1.5 2,773,072 + -3.1 2,773,072 + -3.8 2,773,073 - -1.9 2,773,073 - +0.2 2,773,430 - Psest_2591 0.27 -2.9 2,773,430 - Psest_2591 0.27 -1.8 2,773,430 - Psest_2591 0.27 -3.0 2,773,487 + Psest_2591 0.31 -4.8 2,773,488 - Psest_2591 0.31 -2.1 2,773,488 - Psest_2591 0.31 -3.8
Or see this region's nucleotide sequence