Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1601 and Psest_1602 overlap by 4 nucleotides Psest_1602 and Psest_1603 are separated by 139 nucleotides
Psest_1601: Psest_1601 - Signal transduction histidine kinase, at 1,704,503 to 1,705,825
_1601
Psest_1602: Psest_1602 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 1,705,822 to 1,706,499
_1602
Psest_1603: Psest_1603 - Thiol:disulfide interchange protein, at 1,706,639 to 1,708,375
_1603
Position (kb)
1705
1706
1707 Strain fitness (log2 ratio)
-2
-1
0
1 at 1705.553 kb on + strand, within Psest_1601 at 1705.554 kb on - strand, within Psest_1601 at 1705.554 kb on - strand, within Psest_1601 at 1705.920 kb on + strand, within Psest_1602 at 1706.100 kb on - strand, within Psest_1602 at 1706.100 kb on - strand, within Psest_1602 at 1706.208 kb on - strand, within Psest_1602 at 1706.526 kb on + strand at 1706.544 kb on - strand at 1706.622 kb on + strand at 1706.623 kb on - strand at 1706.626 kb on + strand at 1706.626 kb on + strand at 1706.626 kb on + strand at 1706.626 kb on + strand at 1706.626 kb on + strand at 1706.626 kb on + strand at 1706.626 kb on + strand at 1706.627 kb on - strand at 1706.819 kb on + strand, within Psest_1603 at 1706.819 kb on + strand, within Psest_1603 at 1706.819 kb on + strand, within Psest_1603 at 1706.819 kb on + strand, within Psest_1603 at 1706.819 kb on + strand, within Psest_1603 at 1706.820 kb on - strand, within Psest_1603 at 1706.820 kb on - strand, within Psest_1603 at 1706.820 kb on - strand, within Psest_1603 at 1706.820 kb on - strand, within Psest_1603 at 1706.820 kb on - strand, within Psest_1603 at 1706.820 kb on - strand, within Psest_1603 at 1706.826 kb on - strand, within Psest_1603 at 1706.928 kb on - strand, within Psest_1603 at 1707.269 kb on + strand, within Psest_1603 at 1707.269 kb on + strand, within Psest_1603 at 1707.269 kb on + strand, within Psest_1603 at 1707.269 kb on + strand, within Psest_1603 at 1707.270 kb on - strand, within Psest_1603 at 1707.270 kb on - strand, within Psest_1603 at 1707.270 kb on - strand, within Psest_1603
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,705,553 + Psest_1601 0.79 +0.3 1,705,554 - Psest_1601 0.79 -0.7 1,705,554 - Psest_1601 0.79 +0.2 1,705,920 + Psest_1602 0.14 -0.1 1,706,100 - Psest_1602 0.41 -1.2 1,706,100 - Psest_1602 0.41 -0.9 1,706,208 - Psest_1602 0.57 -0.7 1,706,526 + -0.5 1,706,544 - +0.4 1,706,622 + +0.1 1,706,623 - +1.3 1,706,626 + -0.2 1,706,626 + -0.3 1,706,626 + +1.6 1,706,626 + +0.4 1,706,626 + +0.3 1,706,626 + +0.9 1,706,626 + +0.8 1,706,627 - -0.0 1,706,819 + Psest_1603 0.10 -0.1 1,706,819 + Psest_1603 0.10 +0.1 1,706,819 + Psest_1603 0.10 -0.3 1,706,819 + Psest_1603 0.10 -0.3 1,706,819 + Psest_1603 0.10 -2.2 1,706,820 - Psest_1603 0.10 +0.5 1,706,820 - Psest_1603 0.10 +0.0 1,706,820 - Psest_1603 0.10 -0.1 1,706,820 - Psest_1603 0.10 -1.1 1,706,820 - Psest_1603 0.10 -0.6 1,706,820 - Psest_1603 0.10 -0.6 1,706,826 - Psest_1603 0.11 -0.0 1,706,928 - Psest_1603 0.17 -0.5 1,707,269 + Psest_1603 0.36 -0.0 1,707,269 + Psest_1603 0.36 -0.2 1,707,269 + Psest_1603 0.36 +0.1 1,707,269 + Psest_1603 0.36 -0.9 1,707,270 - Psest_1603 0.36 -0.3 1,707,270 - Psest_1603 0.36 -0.3 1,707,270 - Psest_1603 0.36 -0.6
Or see this region's nucleotide sequence