Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3191 and Psest_3192 overlap by 8 nucleotides Psest_3192 and Psest_3193 are separated by 195 nucleotides
Psest_3191: Psest_3191 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases, at 3,362,987 to 3,363,970
_3191
Psest_3192: Psest_3192 - diguanylate cyclase (GGDEF) domain, at 3,363,963 to 3,365,093
_3192
Psest_3193: Psest_3193 - hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region, at 3,365,289 to 3,366,812
_3193
Position (kb)
3363
3364
3365
3366 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3363.380 kb on + strand, within Psest_3191 at 3363.414 kb on + strand, within Psest_3191 at 3363.414 kb on + strand, within Psest_3191 at 3363.414 kb on + strand, within Psest_3191 at 3363.977 kb on + strand at 3364.438 kb on + strand, within Psest_3192 at 3364.439 kb on - strand, within Psest_3192 at 3364.439 kb on - strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.657 kb on + strand, within Psest_3192 at 3364.657 kb on + strand, within Psest_3192 at 3364.759 kb on + strand, within Psest_3192 at 3364.760 kb on - strand, within Psest_3192 at 3364.760 kb on - strand, within Psest_3192 at 3364.807 kb on + strand, within Psest_3192 at 3364.807 kb on + strand, within Psest_3192 at 3364.807 kb on + strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.963 kb on + strand, within Psest_3192 at 3364.963 kb on + strand, within Psest_3192 at 3365.011 kb on + strand at 3365.011 kb on + strand at 3365.012 kb on - strand at 3365.012 kb on - strand at 3365.046 kb on + strand at 3365.046 kb on + strand at 3365.047 kb on - strand at 3365.047 kb on - strand at 3365.094 kb on - strand at 3365.152 kb on + strand at 3365.152 kb on + strand at 3365.209 kb on + strand at 3365.209 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 3,363,380 + Psest_3191 0.40 +0.4 3,363,414 + Psest_3191 0.43 +0.9 3,363,414 + Psest_3191 0.43 +1.2 3,363,414 + Psest_3191 0.43 -0.5 3,363,977 + +1.1 3,364,438 + Psest_3192 0.42 +3.0 3,364,439 - Psest_3192 0.42 +1.2 3,364,439 - Psest_3192 0.42 +2.5 3,364,654 + Psest_3192 0.61 +0.9 3,364,654 + Psest_3192 0.61 +1.9 3,364,654 + Psest_3192 0.61 +0.9 3,364,654 + Psest_3192 0.61 +0.3 3,364,655 - Psest_3192 0.61 +1.6 3,364,655 - Psest_3192 0.61 +1.7 3,364,655 - Psest_3192 0.61 +0.9 3,364,655 - Psest_3192 0.61 +1.1 3,364,657 + Psest_3192 0.61 +1.6 3,364,657 + Psest_3192 0.61 +2.0 3,364,759 + Psest_3192 0.70 +0.5 3,364,760 - Psest_3192 0.70 +0.9 3,364,760 - Psest_3192 0.70 +0.5 3,364,807 + Psest_3192 0.75 +0.1 3,364,807 + Psest_3192 0.75 +0.4 3,364,807 + Psest_3192 0.75 +1.0 3,364,808 - Psest_3192 0.75 +1.5 3,364,808 - Psest_3192 0.75 +1.7 3,364,808 - Psest_3192 0.75 +0.6 3,364,808 - Psest_3192 0.75 +1.4 3,364,808 - Psest_3192 0.75 +0.8 3,364,963 + Psest_3192 0.88 +1.4 3,364,963 + Psest_3192 0.88 -0.3 3,365,011 + +0.6 3,365,011 + -0.6 3,365,012 - +1.3 3,365,012 - +0.8 3,365,046 + +1.4 3,365,046 + +0.5 3,365,047 - +1.2 3,365,047 - +1.5 3,365,094 - +1.4 3,365,152 + +0.8 3,365,152 + +1.5 3,365,209 + +0.8 3,365,209 + +0.4
Or see this region's nucleotide sequence