Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0698 and Psest_0699 are separated by 138 nucleotides Psest_0699 and Psest_0700 overlap by 13 nucleotides
Psest_0698: Psest_0698 - replicative DNA helicase, at 761,911 to 763,305
_0698
Psest_0699: Psest_0699 - alanine racemase, at 763,444 to 764,520
_0699
Psest_0700: Psest_0700 - diguanylate cyclase (GGDEF) domain, at 764,508 to 766,370
_0700
Position (kb) 763
764
765 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 763.286 kb on - strand at 763.286 kb on - strand at 763.286 kb on - strand at 763.286 kb on - strand at 763.405 kb on + strand at 763.405 kb on + strand at 763.406 kb on - strand at 763.406 kb on - strand at 763.429 kb on + strand at 764.581 kb on + strand at 764.605 kb on + strand at 764.605 kb on + strand at 764.605 kb on + strand at 764.605 kb on + strand at 764.605 kb on + strand at 764.606 kb on - strand at 764.606 kb on - strand at 764.606 kb on - strand at 764.606 kb on - strand at 765.202 kb on - strand, within Psest_0700 at 765.202 kb on - strand, within Psest_0700 at 765.361 kb on + strand, within Psest_0700 at 765.362 kb on - strand, within Psest_0700 at 765.362 kb on - strand, within Psest_0700 at 765.380 kb on - strand, within Psest_0700 at 765.380 kb on - strand, within Psest_0700 at 765.380 kb on - strand, within Psest_0700 at 765.505 kb on + strand, within Psest_0700 at 765.505 kb on + strand, within Psest_0700 at 765.505 kb on + strand, within Psest_0700 at 765.505 kb on + strand, within Psest_0700 at 765.506 kb on - strand, within Psest_0700 at 765.506 kb on - strand, within Psest_0700
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 763,286 - -1.9 763,286 - +3.7 763,286 - -0.2 763,286 - +0.5 763,405 + -0.2 763,405 + -0.6 763,406 - -0.5 763,406 - -1.9 763,429 + -1.7 764,581 + +0.9 764,605 + +0.4 764,605 + +1.9 764,605 + +0.2 764,605 + -0.2 764,605 + -0.3 764,606 - +1.5 764,606 - -1.0 764,606 - +0.7 764,606 - -0.6 765,202 - Psest_0700 0.37 +0.5 765,202 - Psest_0700 0.37 -0.2 765,361 + Psest_0700 0.46 -1.1 765,362 - Psest_0700 0.46 +0.6 765,362 - Psest_0700 0.46 +0.4 765,380 - Psest_0700 0.47 -0.4 765,380 - Psest_0700 0.47 -0.1 765,380 - Psest_0700 0.47 +0.3 765,505 + Psest_0700 0.54 +0.8 765,505 + Psest_0700 0.54 -0.9 765,505 + Psest_0700 0.54 -2.9 765,505 + Psest_0700 0.54 +1.3 765,506 - Psest_0700 0.54 +0.0 765,506 - Psest_0700 0.54 -0.8
Or see this region's nucleotide sequence