Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4273 and Psest_4274 are separated by 85 nucleotides Psest_4274 and Psest_4275 are separated by 111 nucleotides
Psest_4273: Psest_4273 - Lysophospholipase, at 4,463,502 to 4,464,440
_4273
Psest_4274: Psest_4274 - hypothetical protein, at 4,464,526 to 4,465,095
_4274
Psest_4275: Psest_4275 - Outer membrane receptor for ferrienterochelin and colicins, at 4,465,207 to 4,467,270
_4275
Position (kb)
4464
4465
4466 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4463.533 kb on + strand at 4463.533 kb on + strand at 4463.533 kb on + strand at 4463.534 kb on - strand at 4463.534 kb on - strand at 4463.638 kb on + strand, within Psest_4273 at 4463.638 kb on + strand, within Psest_4273 at 4463.638 kb on + strand, within Psest_4273 at 4463.638 kb on + strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.639 kb on - strand, within Psest_4273 at 4463.873 kb on - strand, within Psest_4273 at 4464.197 kb on + strand, within Psest_4273 at 4464.197 kb on + strand, within Psest_4273 at 4464.197 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.205 kb on + strand, within Psest_4273 at 4464.206 kb on - strand, within Psest_4273 at 4464.206 kb on - strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.208 kb on + strand, within Psest_4273 at 4464.209 kb on - strand, within Psest_4273 at 4464.209 kb on - strand, within Psest_4273 at 4464.274 kb on + strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.275 kb on - strand, within Psest_4273 at 4464.343 kb on + strand, within Psest_4273 at 4464.343 kb on + strand, within Psest_4273 at 4464.343 kb on + strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.344 kb on - strand, within Psest_4273 at 4464.545 kb on - strand at 4464.545 kb on - strand at 4464.545 kb on - strand at 4464.812 kb on - strand, within Psest_4274 at 4464.920 kb on + strand, within Psest_4274 at 4464.921 kb on - strand, within Psest_4274 at 4464.952 kb on + strand, within Psest_4274 at 4464.952 kb on + strand, within Psest_4274 at 4464.953 kb on - strand, within Psest_4274 at 4464.953 kb on - strand, within Psest_4274 at 4465.316 kb on - strand at 4465.316 kb on - strand at 4465.807 kb on + strand, within Psest_4275 at 4465.808 kb on - strand, within Psest_4275 at 4465.808 kb on - strand, within Psest_4275 at 4465.870 kb on + strand, within Psest_4275 at 4465.871 kb on - strand, within Psest_4275 at 4465.871 kb on - strand, within Psest_4275 at 4466.042 kb on + strand, within Psest_4275 at 4466.042 kb on + strand, within Psest_4275 at 4466.042 kb on + strand, within Psest_4275 at 4466.042 kb on + strand, within Psest_4275 at 4466.042 kb on + strand, within Psest_4275 at 4466.042 kb on + strand, within Psest_4275 at 4466.043 kb on - strand, within Psest_4275 at 4466.043 kb on - strand, within Psest_4275 at 4466.079 kb on + strand, within Psest_4275 at 4466.080 kb on - strand, within Psest_4275
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 4,463,533 + -1.2 4,463,533 + -1.8 4,463,533 + +0.6 4,463,534 - -0.1 4,463,534 - -0.3 4,463,638 + Psest_4273 0.14 +1.1 4,463,638 + Psest_4273 0.14 +1.5 4,463,638 + Psest_4273 0.14 -0.6 4,463,638 + Psest_4273 0.14 +0.8 4,463,639 - Psest_4273 0.15 -0.1 4,463,639 - Psest_4273 0.15 -1.0 4,463,639 - Psest_4273 0.15 -2.0 4,463,639 - Psest_4273 0.15 +1.0 4,463,639 - Psest_4273 0.15 +0.6 4,463,639 - Psest_4273 0.15 -0.2 4,463,873 - Psest_4273 0.40 -1.2 4,464,197 + Psest_4273 0.74 +1.2 4,464,197 + Psest_4273 0.74 +1.1 4,464,197 + Psest_4273 0.74 +2.8 4,464,205 + Psest_4273 0.75 +0.5 4,464,205 + Psest_4273 0.75 -0.3 4,464,205 + Psest_4273 0.75 +0.0 4,464,205 + Psest_4273 0.75 -1.5 4,464,205 + Psest_4273 0.75 +1.4 4,464,206 - Psest_4273 0.75 +0.3 4,464,206 - Psest_4273 0.75 +0.2 4,464,208 + Psest_4273 0.75 +1.1 4,464,208 + Psest_4273 0.75 +1.1 4,464,208 + Psest_4273 0.75 -2.5 4,464,208 + Psest_4273 0.75 +1.1 4,464,208 + Psest_4273 0.75 +0.4 4,464,208 + Psest_4273 0.75 +0.8 4,464,209 - Psest_4273 0.75 -0.9 4,464,209 - Psest_4273 0.75 -0.0 4,464,274 + Psest_4273 0.82 +1.8 4,464,275 - Psest_4273 0.82 +1.2 4,464,275 - Psest_4273 0.82 +0.6 4,464,275 - Psest_4273 0.82 +0.8 4,464,275 - Psest_4273 0.82 -0.1 4,464,343 + Psest_4273 0.90 +0.7 4,464,343 + Psest_4273 0.90 -0.8 4,464,343 + Psest_4273 0.90 +1.3 4,464,344 - Psest_4273 0.90 +0.8 4,464,344 - Psest_4273 0.90 +0.3 4,464,344 - Psest_4273 0.90 -1.6 4,464,344 - Psest_4273 0.90 +2.4 4,464,545 - +0.5 4,464,545 - +1.2 4,464,545 - -0.4 4,464,812 - Psest_4274 0.50 +0.4 4,464,920 + Psest_4274 0.69 +0.6 4,464,921 - Psest_4274 0.69 +2.3 4,464,952 + Psest_4274 0.75 +2.5 4,464,952 + Psest_4274 0.75 +1.1 4,464,953 - Psest_4274 0.75 +2.2 4,464,953 - Psest_4274 0.75 -0.2 4,465,316 - -0.8 4,465,316 - -0.3 4,465,807 + Psest_4275 0.29 -0.8 4,465,808 - Psest_4275 0.29 -0.0 4,465,808 - Psest_4275 0.29 -0.4 4,465,870 + Psest_4275 0.32 +0.6 4,465,871 - Psest_4275 0.32 -1.5 4,465,871 - Psest_4275 0.32 -0.4 4,466,042 + Psest_4275 0.40 -0.4 4,466,042 + Psest_4275 0.40 -0.2 4,466,042 + Psest_4275 0.40 +0.5 4,466,042 + Psest_4275 0.40 -0.2 4,466,042 + Psest_4275 0.40 -1.1 4,466,042 + Psest_4275 0.40 -1.4 4,466,043 - Psest_4275 0.41 +0.8 4,466,043 - Psest_4275 0.41 +1.0 4,466,079 + Psest_4275 0.42 +0.8 4,466,080 - Psest_4275 0.42 -0.3
Or see this region's nucleotide sequence