Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2636 and Psest_2637 are separated by 112 nucleotides Psest_2637 and Psest_2638 are separated by 18 nucleotides
Psest_2636: Psest_2636 - tryptophan synthase, beta subunit, at 2,819,841 to 2,821,049
_2636
Psest_2637: Psest_2637 - putative methyltransferase, YaeB/AF_0241 family, at 2,821,162 to 2,821,869
_2637
Psest_2638: Psest_2638 - Protein related to penicillin acylase, at 2,821,888 to 2,824,425
_2638
Position (kb)
2821
2822 Strain fitness (log2 ratio)
-2
-1
0
1 at 2820.380 kb on + strand, within Psest_2636 at 2820.397 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.418 kb on - strand, within Psest_2636 at 2820.424 kb on - strand, within Psest_2636 at 2820.724 kb on - strand, within Psest_2636 at 2820.724 kb on - strand, within Psest_2636 at 2820.724 kb on - strand, within Psest_2636 at 2820.813 kb on + strand, within Psest_2636 at 2820.814 kb on - strand, within Psest_2636 at 2820.814 kb on - strand, within Psest_2636 at 2820.840 kb on + strand, within Psest_2636 at 2820.840 kb on + strand, within Psest_2636 at 2820.841 kb on - strand, within Psest_2636 at 2820.841 kb on - strand, within Psest_2636 at 2820.841 kb on - strand, within Psest_2636 at 2820.980 kb on + strand at 2820.994 kb on + strand at 2820.994 kb on + strand at 2820.994 kb on + strand at 2820.994 kb on + strand at 2820.995 kb on - strand at 2820.995 kb on - strand at 2821.023 kb on + strand at 2821.047 kb on + strand at 2821.558 kb on + strand, within Psest_2637 at 2821.559 kb on - strand, within Psest_2637 at 2821.970 kb on + strand at 2821.970 kb on + strand at 2821.970 kb on + strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2821.971 kb on - strand at 2822.044 kb on - strand at 2822.044 kb on - strand at 2822.135 kb on + strand at 2822.155 kb on - strand, within Psest_2638 at 2822.195 kb on + strand, within Psest_2638 at 2822.195 kb on + strand, within Psest_2638 at 2822.239 kb on - strand, within Psest_2638 at 2822.398 kb on - strand, within Psest_2638 at 2822.460 kb on - strand, within Psest_2638 at 2822.516 kb on - strand, within Psest_2638 at 2822.564 kb on + strand, within Psest_2638 at 2822.564 kb on + strand, within Psest_2638 at 2822.565 kb on - strand, within Psest_2638 at 2822.816 kb on + strand, within Psest_2638
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 2,820,380 + Psest_2636 0.45 -0.1 2,820,397 - Psest_2636 0.46 +0.6 2,820,418 - Psest_2636 0.48 -0.7 2,820,418 - Psest_2636 0.48 +0.6 2,820,418 - Psest_2636 0.48 +0.4 2,820,418 - Psest_2636 0.48 -0.9 2,820,418 - Psest_2636 0.48 +0.9 2,820,418 - Psest_2636 0.48 +0.6 2,820,418 - Psest_2636 0.48 -0.8 2,820,424 - Psest_2636 0.48 -0.1 2,820,724 - Psest_2636 0.73 +0.9 2,820,724 - Psest_2636 0.73 -0.4 2,820,724 - Psest_2636 0.73 +0.4 2,820,813 + Psest_2636 0.80 +0.3 2,820,814 - Psest_2636 0.80 +0.4 2,820,814 - Psest_2636 0.80 +0.3 2,820,840 + Psest_2636 0.83 +0.7 2,820,840 + Psest_2636 0.83 +0.6 2,820,841 - Psest_2636 0.83 -0.9 2,820,841 - Psest_2636 0.83 +0.1 2,820,841 - Psest_2636 0.83 +0.5 2,820,980 + +0.3 2,820,994 + -0.1 2,820,994 + +0.5 2,820,994 + +1.3 2,820,994 + -0.3 2,820,995 - -0.4 2,820,995 - -0.2 2,821,023 + -0.1 2,821,047 + -2.3 2,821,558 + Psest_2637 0.56 +1.1 2,821,559 - Psest_2637 0.56 +1.6 2,821,970 + -0.1 2,821,970 + +0.1 2,821,970 + +0.4 2,821,971 - -0.6 2,821,971 - -1.4 2,821,971 - +0.1 2,821,971 - +0.6 2,821,971 - -0.5 2,821,971 - +0.0 2,821,971 - -0.2 2,821,971 - +0.5 2,822,044 - -2.4 2,822,044 - +0.1 2,822,135 + -0.5 2,822,155 - Psest_2638 0.11 -0.1 2,822,195 + Psest_2638 0.12 +0.2 2,822,195 + Psest_2638 0.12 -0.1 2,822,239 - Psest_2638 0.14 -0.2 2,822,398 - Psest_2638 0.20 +0.4 2,822,460 - Psest_2638 0.23 +1.4 2,822,516 - Psest_2638 0.25 +0.1 2,822,564 + Psest_2638 0.27 +0.7 2,822,564 + Psest_2638 0.27 +0.5 2,822,565 - Psest_2638 0.27 +0.7 2,822,816 + Psest_2638 0.37 -0.3
Or see this region's nucleotide sequence