Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1305 and Psest_1306 overlap by 4 nucleotides Psest_1306 and Psest_1307 are separated by 95 nucleotides Psest_1307 and Psest_1308 are separated by 164 nucleotides Psest_1308 and Psest_1309 are separated by 2 nucleotides
Psest_1305: Psest_1305 - Heat shock protein, at 1,407,255 to 1,407,656
_1305
Psest_1306: Psest_1306 - hypothetical protein, at 1,407,653 to 1,408,093
_1306
Psest_1307: Psest_1307 - Dienelactone hydrolase and related enzymes, at 1,408,189 to 1,408,995
_1307
Psest_1308: Psest_1308 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,409,160 to 1,409,861
_1308
Psest_1309: Psest_1309 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,409,864 to 1,410,631
_1309
Position (kb)
1408
1409 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1407.256 kb on + strand at 1407.256 kb on + strand at 1407.256 kb on + strand at 1407.256 kb on + strand at 1407.256 kb on + strand at 1407.256 kb on + strand at 1407.257 kb on - strand at 1407.257 kb on - strand at 1407.257 kb on - strand at 1407.257 kb on - strand at 1407.257 kb on - strand at 1407.279 kb on + strand at 1407.304 kb on - strand, within Psest_1305 at 1407.454 kb on + strand, within Psest_1305 at 1407.490 kb on + strand, within Psest_1305 at 1407.568 kb on + strand, within Psest_1305 at 1407.568 kb on + strand, within Psest_1305 at 1407.569 kb on - strand, within Psest_1305 at 1407.569 kb on - strand, within Psest_1305 at 1407.569 kb on - strand, within Psest_1305 at 1407.679 kb on + strand at 1407.811 kb on + strand, within Psest_1306 at 1407.909 kb on - strand, within Psest_1306 at 1407.935 kb on + strand, within Psest_1306 at 1407.935 kb on + strand, within Psest_1306 at 1408.114 kb on + strand at 1408.115 kb on - strand at 1408.115 kb on - strand at 1408.368 kb on - strand, within Psest_1307 at 1408.584 kb on - strand, within Psest_1307 at 1408.584 kb on - strand, within Psest_1307 at 1408.742 kb on + strand, within Psest_1307 at 1408.743 kb on - strand, within Psest_1307 at 1408.880 kb on + strand, within Psest_1307 at 1408.880 kb on + strand, within Psest_1307 at 1408.881 kb on - strand, within Psest_1307 at 1408.881 kb on - strand, within Psest_1307 at 1408.884 kb on - strand, within Psest_1307 at 1408.917 kb on - strand at 1409.045 kb on + strand at 1409.173 kb on + strand at 1409.174 kb on - strand at 1409.174 kb on - strand at 1409.247 kb on + strand, within Psest_1308 at 1409.247 kb on + strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.248 kb on - strand, within Psest_1308 at 1409.252 kb on - strand, within Psest_1308 at 1409.252 kb on - strand, within Psest_1308 at 1409.377 kb on - strand, within Psest_1308 at 1409.830 kb on + strand at 1409.865 kb on + strand at 1409.865 kb on + strand at 1409.865 kb on + strand at 1409.865 kb on + strand at 1409.865 kb on + strand at 1409.866 kb on - strand at 1409.866 kb on - strand at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.958 kb on + strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309 at 1409.959 kb on - strand, within Psest_1309
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,407,256 + +0.0 1,407,256 + +0.6 1,407,256 + -0.5 1,407,256 + -0.4 1,407,256 + +0.9 1,407,256 + +1.1 1,407,257 - -1.7 1,407,257 - -0.2 1,407,257 - -1.4 1,407,257 - +2.8 1,407,257 - -0.5 1,407,279 + -0.6 1,407,304 - Psest_1305 0.12 +0.6 1,407,454 + Psest_1305 0.50 -0.8 1,407,490 + Psest_1305 0.58 -0.8 1,407,568 + Psest_1305 0.78 -0.2 1,407,568 + Psest_1305 0.78 +1.3 1,407,569 - Psest_1305 0.78 -0.7 1,407,569 - Psest_1305 0.78 +2.3 1,407,569 - Psest_1305 0.78 +0.0 1,407,679 + -0.4 1,407,811 + Psest_1306 0.36 +0.6 1,407,909 - Psest_1306 0.58 -0.8 1,407,935 + Psest_1306 0.64 +0.0 1,407,935 + Psest_1306 0.64 +0.4 1,408,114 + +0.4 1,408,115 - +1.1 1,408,115 - -0.1 1,408,368 - Psest_1307 0.22 -0.0 1,408,584 - Psest_1307 0.49 -0.1 1,408,584 - Psest_1307 0.49 +1.6 1,408,742 + Psest_1307 0.69 -0.2 1,408,743 - Psest_1307 0.69 +0.6 1,408,880 + Psest_1307 0.86 +0.4 1,408,880 + Psest_1307 0.86 +0.1 1,408,881 - Psest_1307 0.86 +0.2 1,408,881 - Psest_1307 0.86 +1.2 1,408,884 - Psest_1307 0.86 -1.0 1,408,917 - +0.3 1,409,045 + +0.1 1,409,173 + -0.4 1,409,174 - -0.4 1,409,174 - -1.3 1,409,247 + Psest_1308 0.12 -2.2 1,409,247 + Psest_1308 0.12 -0.9 1,409,248 - Psest_1308 0.13 -1.1 1,409,248 - Psest_1308 0.13 -2.0 1,409,248 - Psest_1308 0.13 -0.0 1,409,248 - Psest_1308 0.13 +1.0 1,409,248 - Psest_1308 0.13 -0.2 1,409,248 - Psest_1308 0.13 +0.8 1,409,248 - Psest_1308 0.13 -0.4 1,409,248 - Psest_1308 0.13 -1.7 1,409,252 - Psest_1308 0.13 -0.9 1,409,252 - Psest_1308 0.13 -0.2 1,409,377 - Psest_1308 0.31 -0.0 1,409,830 + -0.8 1,409,865 + -0.7 1,409,865 + -0.5 1,409,865 + -3.2 1,409,865 + -0.7 1,409,865 + -0.3 1,409,866 - -1.7 1,409,866 - -1.0 1,409,958 + Psest_1309 0.12 -3.0 1,409,958 + Psest_1309 0.12 +0.6 1,409,958 + Psest_1309 0.12 -0.5 1,409,958 + Psest_1309 0.12 -1.4 1,409,958 + Psest_1309 0.12 -0.7 1,409,958 + Psest_1309 0.12 -1.0 1,409,958 + Psest_1309 0.12 -0.5 1,409,958 + Psest_1309 0.12 -1.0 1,409,959 - Psest_1309 0.12 +0.7 1,409,959 - Psest_1309 0.12 +0.4 1,409,959 - Psest_1309 0.12 -0.6 1,409,959 - Psest_1309 0.12 +0.1 1,409,959 - Psest_1309 0.12 +0.0 1,409,959 - Psest_1309 0.12 -0.0 1,409,959 - Psest_1309 0.12 +0.6 1,409,959 - Psest_1309 0.12 -0.6 1,409,959 - Psest_1309 0.12 +1.2 1,409,959 - Psest_1309 0.12 -1.5 1,409,959 - Psest_1309 0.12 -0.7 1,409,959 - Psest_1309 0.12 -0.5 1,409,959 - Psest_1309 0.12 +0.4
Or see this region's nucleotide sequence