Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3460 and Psest_3461 are separated by 31 nucleotides Psest_3461 and Psest_3462 overlap by 11 nucleotides Psest_3462 and Psest_3463 are separated by 2 nucleotides Psest_3463 and Psest_3464 are separated by 81 nucleotides
Psest_3460: Psest_3460 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 3,630,106 to 3,632,232
_3460
Psest_3461: Psest_3461 - Diacylglycerol kinase, at 3,632,264 to 3,632,659
_3461
Psest_3462: Psest_3462 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 3,632,649 to 3,633,368
_3462
Psest_3463: Psest_3463 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 3,633,371 to 3,634,048
_3463
Psest_3464: Psest_3464 - Signal transduction histidine kinase, at 3,634,130 to 3,635,407
_3464
Position (kb)
3632
3633
3634 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3631.844 kb on + strand, within Psest_3460 at 3631.845 kb on - strand, within Psest_3460 at 3631.845 kb on - strand, within Psest_3460 at 3631.887 kb on - strand, within Psest_3460 at 3631.887 kb on - strand, within Psest_3460 at 3631.983 kb on + strand, within Psest_3460 at 3632.015 kb on + strand, within Psest_3460 at 3632.015 kb on + strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.016 kb on - strand, within Psest_3460 at 3632.105 kb on + strand at 3632.106 kb on - strand at 3632.106 kb on - strand at 3632.106 kb on - strand at 3632.965 kb on + strand, within Psest_3462 at 3632.969 kb on - strand, within Psest_3462 at 3632.969 kb on - strand, within Psest_3462 at 3633.076 kb on + strand, within Psest_3462 at 3633.076 kb on + strand, within Psest_3462 at 3633.076 kb on + strand, within Psest_3462 at 3633.076 kb on + strand, within Psest_3462 at 3633.076 kb on + strand, within Psest_3462 at 3633.077 kb on - strand, within Psest_3462 at 3633.077 kb on - strand, within Psest_3462 at 3633.077 kb on - strand, within Psest_3462 at 3633.077 kb on - strand, within Psest_3462 at 3633.302 kb on + strand at 3633.393 kb on + strand at 3633.394 kb on - strand at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.558 kb on + strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.559 kb on - strand, within Psest_3463 at 3633.982 kb on - strand at 3633.982 kb on - strand at 3633.988 kb on - strand at 3634.005 kb on + strand at 3634.005 kb on + strand at 3634.005 kb on + strand at 3634.006 kb on - strand at 3634.006 kb on - strand at 3634.006 kb on - strand at 3634.006 kb on - strand at 3634.006 kb on - strand at 3634.006 kb on - strand at 3634.222 kb on + strand at 3634.223 kb on - strand at 3634.223 kb on - strand at 3634.223 kb on - strand at 3634.223 kb on - strand at 3634.223 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 3,631,844 + Psest_3460 0.82 +1.7 3,631,845 - Psest_3460 0.82 +1.5 3,631,845 - Psest_3460 0.82 +0.1 3,631,887 - Psest_3460 0.84 +0.3 3,631,887 - Psest_3460 0.84 +0.6 3,631,983 + Psest_3460 0.88 +0.1 3,632,015 + Psest_3460 0.90 -0.6 3,632,015 + Psest_3460 0.90 -1.3 3,632,016 - Psest_3460 0.90 -0.2 3,632,016 - Psest_3460 0.90 +0.2 3,632,016 - Psest_3460 0.90 -0.5 3,632,016 - Psest_3460 0.90 -0.4 3,632,016 - Psest_3460 0.90 +0.8 3,632,016 - Psest_3460 0.90 +0.9 3,632,016 - Psest_3460 0.90 +0.2 3,632,105 + +0.1 3,632,106 - +0.0 3,632,106 - -0.2 3,632,106 - -0.0 3,632,965 + Psest_3462 0.44 -0.4 3,632,969 - Psest_3462 0.44 +0.3 3,632,969 - Psest_3462 0.44 +0.8 3,633,076 + Psest_3462 0.59 +0.2 3,633,076 + Psest_3462 0.59 -1.3 3,633,076 + Psest_3462 0.59 -0.8 3,633,076 + Psest_3462 0.59 -1.3 3,633,076 + Psest_3462 0.59 -1.9 3,633,077 - Psest_3462 0.59 -0.1 3,633,077 - Psest_3462 0.59 -0.0 3,633,077 - Psest_3462 0.59 +0.5 3,633,077 - Psest_3462 0.59 +0.4 3,633,302 + -1.1 3,633,393 + -1.1 3,633,394 - +1.8 3,633,558 + Psest_3463 0.28 +1.6 3,633,558 + Psest_3463 0.28 -0.7 3,633,558 + Psest_3463 0.28 +0.5 3,633,558 + Psest_3463 0.28 +0.8 3,633,558 + Psest_3463 0.28 +0.4 3,633,558 + Psest_3463 0.28 +0.1 3,633,558 + Psest_3463 0.28 +1.4 3,633,558 + Psest_3463 0.28 +0.3 3,633,558 + Psest_3463 0.28 +1.2 3,633,558 + Psest_3463 0.28 +0.9 3,633,558 + Psest_3463 0.28 +0.6 3,633,559 - Psest_3463 0.28 -1.3 3,633,559 - Psest_3463 0.28 +0.5 3,633,559 - Psest_3463 0.28 +1.9 3,633,559 - Psest_3463 0.28 +0.2 3,633,559 - Psest_3463 0.28 +0.2 3,633,559 - Psest_3463 0.28 +0.7 3,633,559 - Psest_3463 0.28 +0.5 3,633,559 - Psest_3463 0.28 +2.1 3,633,559 - Psest_3463 0.28 +0.4 3,633,559 - Psest_3463 0.28 +0.4 3,633,559 - Psest_3463 0.28 -0.1 3,633,982 - -0.3 3,633,982 - -0.4 3,633,988 - -0.3 3,634,005 + +0.0 3,634,005 + +0.8 3,634,005 + +0.6 3,634,006 - +1.1 3,634,006 - -0.7 3,634,006 - +0.2 3,634,006 - +0.4 3,634,006 - +0.3 3,634,006 - +0.2 3,634,222 + -0.2 3,634,223 - -0.7 3,634,223 - -0.7 3,634,223 - +0.5 3,634,223 - +0.6 3,634,223 - +0.8
Or see this region's nucleotide sequence