Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1889 and Psest_1890 are separated by 28 nucleotides Psest_1890 and Psest_1891 are separated by 19 nucleotides Psest_1891 and Psest_1892 are separated by 174 nucleotides
Psest_1889: Psest_1889 - tryptophanyl-tRNA synthetase, at 1,997,731 to 1,998,945
_1889
Psest_1890: Psest_1890 - Uncharacterized conserved protein, at 1,998,974 to 1,999,795
_1890
Psest_1891: Psest_1891 - segregation and condensation protein B, at 1,999,815 to 2,000,585
_1891
Psest_1892: Psest_1892 - 6-phosphogluconate dehydratase, at 2,000,760 to 2,002,589
_1892
Position (kb)
1998
1999
2000 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1997.981 kb on + strand, within Psest_1889 at 1998.074 kb on - strand, within Psest_1889 at 1998.074 kb on - strand, within Psest_1889 at 1998.074 kb on - strand, within Psest_1889 at 1998.115 kb on - strand, within Psest_1889 at 1998.119 kb on - strand, within Psest_1889 at 1998.119 kb on - strand, within Psest_1889 at 1998.166 kb on + strand, within Psest_1889 at 1998.167 kb on - strand, within Psest_1889 at 1998.253 kb on + strand, within Psest_1889 at 1998.254 kb on - strand, within Psest_1889 at 1998.329 kb on - strand, within Psest_1889 at 1998.329 kb on - strand, within Psest_1889 at 1998.350 kb on - strand, within Psest_1889 at 1998.443 kb on - strand, within Psest_1889 at 1998.565 kb on + strand, within Psest_1889 at 1998.565 kb on + strand, within Psest_1889 at 1998.566 kb on - strand, within Psest_1889 at 1998.566 kb on - strand, within Psest_1889 at 1998.566 kb on - strand, within Psest_1889 at 1998.566 kb on - strand, within Psest_1889 at 1998.632 kb on + strand, within Psest_1889 at 1998.632 kb on + strand, within Psest_1889 at 1998.632 kb on + strand, within Psest_1889 at 1998.633 kb on - strand, within Psest_1889 at 1998.633 kb on - strand, within Psest_1889 at 1998.826 kb on + strand at 1998.827 kb on - strand at 1999.026 kb on + strand at 1999.043 kb on + strand at 1999.044 kb on - strand at 1999.079 kb on + strand, within Psest_1890 at 1999.079 kb on + strand, within Psest_1890 at 1999.079 kb on + strand, within Psest_1890 at 1999.079 kb on + strand, within Psest_1890 at 1999.079 kb on + strand, within Psest_1890 at 1999.080 kb on - strand, within Psest_1890 at 1999.080 kb on - strand, within Psest_1890 at 1999.080 kb on - strand, within Psest_1890 at 1999.145 kb on + strand, within Psest_1890 at 1999.145 kb on + strand, within Psest_1890 at 1999.146 kb on - strand, within Psest_1890 at 1999.146 kb on - strand, within Psest_1890 at 1999.146 kb on - strand, within Psest_1890 at 1999.180 kb on + strand, within Psest_1890 at 1999.208 kb on + strand, within Psest_1890 at 1999.208 kb on + strand, within Psest_1890 at 1999.208 kb on + strand, within Psest_1890 at 1999.208 kb on + strand, within Psest_1890 at 1999.208 kb on + strand, within Psest_1890 at 1999.208 kb on + strand, within Psest_1890 at 1999.209 kb on - strand, within Psest_1890 at 1999.209 kb on - strand, within Psest_1890 at 1999.209 kb on - strand, within Psest_1890 at 1999.209 kb on - strand, within Psest_1890 at 1999.209 kb on - strand, within Psest_1890 at 1999.209 kb on - strand, within Psest_1890 at 1999.263 kb on - strand, within Psest_1890 at 1999.263 kb on - strand, within Psest_1890 at 1999.552 kb on + strand, within Psest_1890 at 1999.553 kb on - strand, within Psest_1890 at 2000.719 kb on + strand at 2000.720 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,997,981 + Psest_1889 0.21 -1.9 1,998,074 - Psest_1889 0.28 +0.7 1,998,074 - Psest_1889 0.28 -1.2 1,998,074 - Psest_1889 0.28 +0.0 1,998,115 - Psest_1889 0.32 +0.8 1,998,119 - Psest_1889 0.32 +0.6 1,998,119 - Psest_1889 0.32 -0.3 1,998,166 + Psest_1889 0.36 +0.2 1,998,167 - Psest_1889 0.36 +1.5 1,998,253 + Psest_1889 0.43 +0.2 1,998,254 - Psest_1889 0.43 +1.8 1,998,329 - Psest_1889 0.49 -1.5 1,998,329 - Psest_1889 0.49 +0.7 1,998,350 - Psest_1889 0.51 +0.3 1,998,443 - Psest_1889 0.59 +1.0 1,998,565 + Psest_1889 0.69 -0.5 1,998,565 + Psest_1889 0.69 -0.4 1,998,566 - Psest_1889 0.69 +0.9 1,998,566 - Psest_1889 0.69 +0.9 1,998,566 - Psest_1889 0.69 +0.2 1,998,566 - Psest_1889 0.69 +1.4 1,998,632 + Psest_1889 0.74 +0.5 1,998,632 + Psest_1889 0.74 -1.1 1,998,632 + Psest_1889 0.74 -0.7 1,998,633 - Psest_1889 0.74 -0.5 1,998,633 - Psest_1889 0.74 +1.3 1,998,826 + -0.6 1,998,827 - +1.0 1,999,026 + +1.5 1,999,043 + +0.3 1,999,044 - +0.7 1,999,079 + Psest_1890 0.13 -0.6 1,999,079 + Psest_1890 0.13 +0.4 1,999,079 + Psest_1890 0.13 -0.3 1,999,079 + Psest_1890 0.13 +1.5 1,999,079 + Psest_1890 0.13 +1.3 1,999,080 - Psest_1890 0.13 +0.4 1,999,080 - Psest_1890 0.13 +0.9 1,999,080 - Psest_1890 0.13 +1.8 1,999,145 + Psest_1890 0.21 +0.6 1,999,145 + Psest_1890 0.21 +0.7 1,999,146 - Psest_1890 0.21 +0.6 1,999,146 - Psest_1890 0.21 +1.0 1,999,146 - Psest_1890 0.21 +0.3 1,999,180 + Psest_1890 0.25 -0.1 1,999,208 + Psest_1890 0.28 +1.2 1,999,208 + Psest_1890 0.28 +0.7 1,999,208 + Psest_1890 0.28 -0.7 1,999,208 + Psest_1890 0.28 +0.1 1,999,208 + Psest_1890 0.28 +0.5 1,999,208 + Psest_1890 0.28 +0.6 1,999,209 - Psest_1890 0.29 +0.7 1,999,209 - Psest_1890 0.29 -0.7 1,999,209 - Psest_1890 0.29 -1.9 1,999,209 - Psest_1890 0.29 +1.3 1,999,209 - Psest_1890 0.29 +0.9 1,999,209 - Psest_1890 0.29 +0.6 1,999,263 - Psest_1890 0.35 -0.5 1,999,263 - Psest_1890 0.35 +0.9 1,999,552 + Psest_1890 0.70 -0.4 1,999,553 - Psest_1890 0.70 +1.1 2,000,719 + +2.1 2,000,720 - +0.5
Or see this region's nucleotide sequence