Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1427 and Psest_1428 are separated by 13 nucleotides Psest_1428 and Psest_1429 are separated by 80 nucleotides
Psest_1427: Psest_1427 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 1,535,817 to 1,536,839
_1427
Psest_1428: Psest_1428 - Threonine dehydrogenase and related Zn-dependent dehydrogenases, at 1,536,853 to 1,537,941
_1428
Psest_1429: Psest_1429 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit, at 1,538,022 to 1,539,011
_1429
Position (kb)
1536
1537
1538 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1536.008 kb on - strand, within Psest_1427 at 1536.008 kb on - strand, within Psest_1427 at 1536.232 kb on + strand, within Psest_1427 at 1536.232 kb on + strand, within Psest_1427 at 1536.232 kb on + strand, within Psest_1427 at 1536.232 kb on + strand, within Psest_1427 at 1536.232 kb on + strand, within Psest_1427 at 1536.233 kb on - strand, within Psest_1427 at 1536.233 kb on - strand, within Psest_1427 at 1536.233 kb on - strand, within Psest_1427 at 1536.313 kb on + strand, within Psest_1427 at 1536.314 kb on - strand, within Psest_1427 at 1536.314 kb on - strand, within Psest_1427 at 1536.314 kb on - strand, within Psest_1427 at 1536.367 kb on + strand, within Psest_1427 at 1536.421 kb on + strand, within Psest_1427 at 1536.514 kb on + strand, within Psest_1427 at 1536.515 kb on - strand, within Psest_1427 at 1536.515 kb on - strand, within Psest_1427 at 1536.515 kb on - strand, within Psest_1427 at 1536.515 kb on - strand, within Psest_1427 at 1536.538 kb on + strand, within Psest_1427 at 1536.538 kb on + strand, within Psest_1427 at 1536.538 kb on + strand, within Psest_1427 at 1536.539 kb on - strand, within Psest_1427 at 1536.539 kb on - strand, within Psest_1427 at 1536.539 kb on - strand, within Psest_1427 at 1536.688 kb on + strand, within Psest_1427 at 1536.688 kb on + strand, within Psest_1427 at 1536.689 kb on - strand, within Psest_1427 at 1536.825 kb on + strand at 1536.826 kb on - strand at 1536.826 kb on - strand at 1536.826 kb on - strand at 1537.394 kb on - strand, within Psest_1428 at 1537.394 kb on - strand, within Psest_1428 at 1537.394 kb on - strand, within Psest_1428 at 1537.555 kb on + strand, within Psest_1428 at 1537.589 kb on + strand, within Psest_1428 at 1537.589 kb on + strand, within Psest_1428 at 1537.791 kb on - strand, within Psest_1428 at 1538.231 kb on - strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.681 kb on + strand, within Psest_1429 at 1538.682 kb on - strand, within Psest_1429 at 1538.682 kb on - strand, within Psest_1429 at 1538.682 kb on - strand, within Psest_1429 at 1538.682 kb on - strand, within Psest_1429 at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.923 kb on + strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand at 1538.924 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,536,008 - Psest_1427 0.19 +0.3 1,536,008 - Psest_1427 0.19 +1.1 1,536,232 + Psest_1427 0.41 -0.6 1,536,232 + Psest_1427 0.41 -0.1 1,536,232 + Psest_1427 0.41 +0.3 1,536,232 + Psest_1427 0.41 +0.8 1,536,232 + Psest_1427 0.41 +0.2 1,536,233 - Psest_1427 0.41 -0.5 1,536,233 - Psest_1427 0.41 +0.7 1,536,233 - Psest_1427 0.41 -0.3 1,536,313 + Psest_1427 0.48 +0.8 1,536,314 - Psest_1427 0.49 +0.9 1,536,314 - Psest_1427 0.49 -0.1 1,536,314 - Psest_1427 0.49 -0.1 1,536,367 + Psest_1427 0.54 -1.6 1,536,421 + Psest_1427 0.59 -0.4 1,536,514 + Psest_1427 0.68 +0.3 1,536,515 - Psest_1427 0.68 -0.4 1,536,515 - Psest_1427 0.68 +0.2 1,536,515 - Psest_1427 0.68 +0.9 1,536,515 - Psest_1427 0.68 -3.0 1,536,538 + Psest_1427 0.70 -1.3 1,536,538 + Psest_1427 0.70 +0.0 1,536,538 + Psest_1427 0.70 -0.4 1,536,539 - Psest_1427 0.71 -0.2 1,536,539 - Psest_1427 0.71 -0.3 1,536,539 - Psest_1427 0.71 +0.9 1,536,688 + Psest_1427 0.85 -0.0 1,536,688 + Psest_1427 0.85 -0.4 1,536,689 - Psest_1427 0.85 +0.0 1,536,825 + +0.5 1,536,826 - -1.6 1,536,826 - -0.4 1,536,826 - +0.1 1,537,394 - Psest_1428 0.50 -2.1 1,537,394 - Psest_1428 0.50 +1.7 1,537,394 - Psest_1428 0.50 +0.5 1,537,555 + Psest_1428 0.64 +0.5 1,537,589 + Psest_1428 0.68 -0.6 1,537,589 + Psest_1428 0.68 +0.7 1,537,791 - Psest_1428 0.86 +0.9 1,538,231 - Psest_1429 0.21 +1.2 1,538,681 + Psest_1429 0.67 +0.4 1,538,681 + Psest_1429 0.67 +0.0 1,538,681 + Psest_1429 0.67 -0.3 1,538,681 + Psest_1429 0.67 -0.2 1,538,681 + Psest_1429 0.67 +1.4 1,538,681 + Psest_1429 0.67 -0.1 1,538,681 + Psest_1429 0.67 -0.5 1,538,681 + Psest_1429 0.67 -0.3 1,538,682 - Psest_1429 0.67 +0.0 1,538,682 - Psest_1429 0.67 +0.1 1,538,682 - Psest_1429 0.67 -0.1 1,538,682 - Psest_1429 0.67 -0.6 1,538,923 + -0.6 1,538,923 + +0.1 1,538,923 + +1.5 1,538,923 + -0.1 1,538,923 + +1.3 1,538,923 + -0.2 1,538,923 + -0.6 1,538,923 + -1.5 1,538,923 + -1.1 1,538,924 - +0.5 1,538,924 - +0.8 1,538,924 - -0.3 1,538,924 - +2.2 1,538,924 - +0.0 1,538,924 - +0.4 1,538,924 - -0.2 1,538,924 - +0.3 1,538,924 - -0.7 1,538,924 - -0.4 1,538,924 - +1.5
Or see this region's nucleotide sequence