Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3506 and Psest_3507 are separated by 98 nucleotides Psest_3507 and Psest_3508 are separated by 3 nucleotides Psest_3508 and Psest_3509 are separated by 123 nucleotides
Psest_3506: Psest_3506 - Kef-type K+ transport system, predicted NAD-binding component, at 3,679,934 to 3,681,622
_3506
Psest_3507: Psest_3507 - FOG: EAL domain, at 3,681,721 to 3,682,533
_3507
Psest_3508: Psest_3508 - Putative intracellular protease/amidase, at 3,682,537 to 3,683,217
_3508
Psest_3509: Psest_3509 - Methyl-accepting chemotaxis protein, at 3,683,341 to 3,685,230
_3509
Position (kb)
3682
3683
3684 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3681.842 kb on - strand, within Psest_3507 at 3681.881 kb on + strand, within Psest_3507 at 3681.881 kb on + strand, within Psest_3507 at 3681.881 kb on + strand, within Psest_3507 at 3681.882 kb on - strand, within Psest_3507 at 3681.882 kb on - strand, within Psest_3507 at 3682.063 kb on + strand, within Psest_3507 at 3682.531 kb on + strand at 3682.655 kb on + strand, within Psest_3508 at 3682.772 kb on + strand, within Psest_3508 at 3682.773 kb on - strand, within Psest_3508 at 3682.773 kb on - strand, within Psest_3508 at 3682.922 kb on + strand, within Psest_3508 at 3682.971 kb on + strand, within Psest_3508 at 3682.971 kb on + strand, within Psest_3508 at 3683.092 kb on + strand, within Psest_3508 at 3683.092 kb on + strand, within Psest_3508 at 3683.113 kb on + strand, within Psest_3508 at 3683.113 kb on + strand, within Psest_3508 at 3683.113 kb on + strand, within Psest_3508 at 3683.113 kb on + strand, within Psest_3508 at 3683.114 kb on - strand, within Psest_3508 at 3683.114 kb on - strand, within Psest_3508 at 3683.114 kb on - strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.123 kb on + strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.124 kb on - strand, within Psest_3508 at 3683.126 kb on + strand, within Psest_3508 at 3683.324 kb on + strand at 3683.324 kb on + strand at 3683.325 kb on - strand at 3683.325 kb on - strand at 3683.728 kb on + strand, within Psest_3509 at 3683.729 kb on - strand, within Psest_3509 at 3683.729 kb on - strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.186 kb on + strand, within Psest_3509 at 3684.187 kb on - strand, within Psest_3509 at 3684.187 kb on - strand, within Psest_3509 at 3684.187 kb on - strand, within Psest_3509 at 3684.187 kb on - strand, within Psest_3509 at 3684.187 kb on - strand, within Psest_3509 at 3684.192 kb on + strand, within Psest_3509 at 3684.192 kb on + strand, within Psest_3509 at 3684.192 kb on + strand, within Psest_3509
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,681,842 - Psest_3507 0.15 -0.4 3,681,881 + Psest_3507 0.20 +0.4 3,681,881 + Psest_3507 0.20 +1.1 3,681,881 + Psest_3507 0.20 -0.6 3,681,882 - Psest_3507 0.20 -0.7 3,681,882 - Psest_3507 0.20 +2.3 3,682,063 + Psest_3507 0.42 -1.8 3,682,531 + +2.2 3,682,655 + Psest_3508 0.17 -0.9 3,682,772 + Psest_3508 0.35 +0.2 3,682,773 - Psest_3508 0.35 +1.3 3,682,773 - Psest_3508 0.35 +2.3 3,682,922 + Psest_3508 0.57 +1.3 3,682,971 + Psest_3508 0.64 +0.1 3,682,971 + Psest_3508 0.64 +0.4 3,683,092 + Psest_3508 0.81 -0.2 3,683,092 + Psest_3508 0.81 +0.8 3,683,113 + Psest_3508 0.85 +0.3 3,683,113 + Psest_3508 0.85 +1.3 3,683,113 + Psest_3508 0.85 -2.2 3,683,113 + Psest_3508 0.85 +0.1 3,683,114 - Psest_3508 0.85 -2.5 3,683,114 - Psest_3508 0.85 +1.0 3,683,114 - Psest_3508 0.85 -0.0 3,683,123 + Psest_3508 0.86 +1.6 3,683,123 + Psest_3508 0.86 -0.5 3,683,123 + Psest_3508 0.86 +1.3 3,683,123 + Psest_3508 0.86 +0.7 3,683,123 + Psest_3508 0.86 +1.4 3,683,123 + Psest_3508 0.86 +0.5 3,683,123 + Psest_3508 0.86 -0.2 3,683,123 + Psest_3508 0.86 -1.0 3,683,124 - Psest_3508 0.86 +0.8 3,683,124 - Psest_3508 0.86 +2.0 3,683,124 - Psest_3508 0.86 +2.0 3,683,124 - Psest_3508 0.86 +1.7 3,683,124 - Psest_3508 0.86 +1.2 3,683,124 - Psest_3508 0.86 -0.3 3,683,124 - Psest_3508 0.86 +1.1 3,683,124 - Psest_3508 0.86 +0.7 3,683,126 + Psest_3508 0.86 -1.4 3,683,324 + -1.3 3,683,324 + -1.6 3,683,325 - +0.0 3,683,325 - +1.3 3,683,728 + Psest_3509 0.20 +0.3 3,683,729 - Psest_3509 0.21 +2.1 3,683,729 - Psest_3509 0.21 -1.4 3,684,186 + Psest_3509 0.45 -4.1 3,684,186 + Psest_3509 0.45 +1.6 3,684,186 + Psest_3509 0.45 +2.3 3,684,186 + Psest_3509 0.45 +1.7 3,684,186 + Psest_3509 0.45 +1.2 3,684,186 + Psest_3509 0.45 +1.6 3,684,186 + Psest_3509 0.45 -1.0 3,684,187 - Psest_3509 0.45 -1.2 3,684,187 - Psest_3509 0.45 -1.8 3,684,187 - Psest_3509 0.45 -1.6 3,684,187 - Psest_3509 0.45 +0.2 3,684,187 - Psest_3509 0.45 +0.4 3,684,192 + Psest_3509 0.45 +0.7 3,684,192 + Psest_3509 0.45 +0.5 3,684,192 + Psest_3509 0.45 +1.1
Or see this region's nucleotide sequence