Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3247

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_3246 and Psest_3247 are separated by 58 nucleotidesPsest_3247 and Psest_3248 are separated by 14 nucleotides Psest_3246: Psest_3246 - Protein of unknown function (DUF2914)., at 3,416,081 to 3,417,103 _3246 Psest_3247: Psest_3247 - Uncharacterized membrane protein, at 3,417,162 to 3,417,680 _3247 Psest_3248: Psest_3248 - Glucose/sorbosone dehydrogenases, at 3,417,695 to 3,419,026 _3248 Position (kb) 3417 3418Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3416.317 kb on - strand, within Psest_3246at 3416.477 kb on + strand, within Psest_3246at 3416.477 kb on + strand, within Psest_3246at 3416.477 kb on + strand, within Psest_3246at 3416.478 kb on - strand, within Psest_3246at 3416.481 kb on - strand, within Psest_3246at 3416.867 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.909 kb on + strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3416.910 kb on - strand, within Psest_3246at 3417.132 kb on + strandat 3417.133 kb on - strandat 3417.458 kb on + strand, within Psest_3247at 3417.458 kb on + strand, within Psest_3247at 3417.572 kb on - strand, within Psest_3247at 3417.679 kb on - strandat 3417.739 kb on - strandat 3417.739 kb on - strandat 3417.739 kb on - strandat 3417.804 kb on - strandat 3417.922 kb on - strand, within Psest_3248at 3418.205 kb on + strand, within Psest_3248at 3418.205 kb on + strand, within Psest_3248at 3418.205 kb on + strand, within Psest_3248at 3418.206 kb on - strand, within Psest_3248at 3418.206 kb on - strand, within Psest_3248at 3418.209 kb on + strand, within Psest_3248at 3418.293 kb on + strand, within Psest_3248at 3418.294 kb on - strand, within Psest_3248at 3418.294 kb on - strand, within Psest_3248at 3418.361 kb on + strand, within Psest_3248at 3418.361 kb on + strand, within Psest_3248at 3418.362 kb on - strand, within Psest_3248at 3418.362 kb on - strand, within Psest_3248at 3418.362 kb on - strand, within Psest_3248at 3418.580 kb on + strand, within Psest_3248at 3418.580 kb on + strand, within Psest_3248at 3418.580 kb on + strand, within Psest_3248at 3418.580 kb on + strand, within Psest_3248at 3418.581 kb on - strand, within Psest_3248at 3418.581 kb on - strand, within Psest_3248at 3418.581 kb on - strand, within Psest_3248at 3418.610 kb on + strand, within Psest_3248at 3418.622 kb on + strand, within Psest_3248at 3418.629 kb on - strand, within Psest_3248at 3418.629 kb on - strand, within Psest_3248at 3418.629 kb on - strand, within Psest_3248at 3418.629 kb on - strand, within Psest_3248at 3418.629 kb on - strand, within Psest_3248at 3418.629 kb on - strand, within Psest_3248

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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3,416,317 - Psest_3246 0.23 -1.1
3,416,477 + Psest_3246 0.39 -0.3
3,416,477 + Psest_3246 0.39 -0.0
3,416,477 + Psest_3246 0.39 +1.5
3,416,478 - Psest_3246 0.39 +1.4
3,416,481 - Psest_3246 0.39 -0.2
3,416,867 + Psest_3246 0.77 +2.3
3,416,909 + Psest_3246 0.81 -1.9
3,416,909 + Psest_3246 0.81 -2.0
3,416,909 + Psest_3246 0.81 +1.5
3,416,909 + Psest_3246 0.81 +1.1
3,416,909 + Psest_3246 0.81 -0.3
3,416,909 + Psest_3246 0.81 -1.6
3,416,909 + Psest_3246 0.81 +0.6
3,416,909 + Psest_3246 0.81 +1.0
3,416,909 + Psest_3246 0.81 +0.1
3,416,910 - Psest_3246 0.81 +0.8
3,416,910 - Psest_3246 0.81 -0.6
3,416,910 - Psest_3246 0.81 +0.9
3,416,910 - Psest_3246 0.81 +2.0
3,416,910 - Psest_3246 0.81 -1.8
3,416,910 - Psest_3246 0.81 -1.0
3,416,910 - Psest_3246 0.81 -3.3
3,417,132 + -1.1
3,417,133 - +0.4
3,417,458 + Psest_3247 0.57 +1.9
3,417,458 + Psest_3247 0.57 +1.1
3,417,572 - Psest_3247 0.79 +0.3
3,417,679 - -3.4
3,417,739 - -0.5
3,417,739 - -2.0
3,417,739 - -1.8
3,417,804 - -1.2
3,417,922 - Psest_3248 0.17 +1.5
3,418,205 + Psest_3248 0.38 +0.9
3,418,205 + Psest_3248 0.38 -2.4
3,418,205 + Psest_3248 0.38 -4.5
3,418,206 - Psest_3248 0.38 -1.6
3,418,206 - Psest_3248 0.38 +1.3
3,418,209 + Psest_3248 0.39 +0.1
3,418,293 + Psest_3248 0.45 -0.9
3,418,294 - Psest_3248 0.45 -2.6
3,418,294 - Psest_3248 0.45 -0.1
3,418,361 + Psest_3248 0.50 +1.2
3,418,361 + Psest_3248 0.50 -0.5
3,418,362 - Psest_3248 0.50 +0.1
3,418,362 - Psest_3248 0.50 +1.0
3,418,362 - Psest_3248 0.50 +0.7
3,418,580 + Psest_3248 0.66 -0.6
3,418,580 + Psest_3248 0.66 +0.9
3,418,580 + Psest_3248 0.66 -2.0
3,418,580 + Psest_3248 0.66 -1.2
3,418,581 - Psest_3248 0.67 +0.1
3,418,581 - Psest_3248 0.67 +0.6
3,418,581 - Psest_3248 0.67 -0.9
3,418,610 + Psest_3248 0.69 +0.6
3,418,622 + Psest_3248 0.70 -0.4
3,418,629 - Psest_3248 0.70 -1.3
3,418,629 - Psest_3248 0.70 -0.2
3,418,629 - Psest_3248 0.70 -1.6
3,418,629 - Psest_3248 0.70 +1.5
3,418,629 - Psest_3248 0.70 -0.5
3,418,629 - Psest_3248 0.70 -0.6

Or see this region's nucleotide sequence