Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2990 and Psest_2991 are separated by 49 nucleotides Psest_2991 and Psest_2992 are separated by 72 nucleotides Psest_2992 and Psest_2993 are separated by 112 nucleotides
Psest_2990: Psest_2990 - Threonine aldolase, at 3,181,193 to 3,182,218
_2990
Psest_2991: Psest_2991 - hypothetical protein, at 3,182,268 to 3,183,488
_2991
Psest_2992: Psest_2992 - Uncharacterized conserved protein, at 3,183,561 to 3,184,010
_2992
Psest_2993: Psest_2993 - hypothetical protein, at 3,184,123 to 3,184,527
_2993
Position (kb)
3182
3183
3184 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3181.378 kb on - strand, within Psest_2990 at 3181.378 kb on - strand, within Psest_2990 at 3181.378 kb on - strand, within Psest_2990 at 3181.496 kb on + strand, within Psest_2990 at 3181.771 kb on - strand, within Psest_2990 at 3181.798 kb on + strand, within Psest_2990 at 3181.798 kb on + strand, within Psest_2990 at 3181.799 kb on - strand, within Psest_2990 at 3181.799 kb on - strand, within Psest_2990 at 3181.799 kb on - strand, within Psest_2990 at 3181.953 kb on + strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.954 kb on - strand, within Psest_2990 at 3181.959 kb on + strand, within Psest_2990 at 3181.959 kb on + strand, within Psest_2990 at 3181.959 kb on + strand, within Psest_2990 at 3181.959 kb on + strand, within Psest_2990 at 3181.964 kb on - strand, within Psest_2990 at 3181.964 kb on - strand, within Psest_2990 at 3181.964 kb on - strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.986 kb on + strand, within Psest_2990 at 3181.987 kb on - strand, within Psest_2990 at 3181.987 kb on - strand, within Psest_2990 at 3181.987 kb on - strand, within Psest_2990 at 3182.035 kb on + strand, within Psest_2990 at 3182.036 kb on - strand, within Psest_2990 at 3182.036 kb on - strand, within Psest_2990 at 3182.036 kb on - strand, within Psest_2990 at 3182.036 kb on - strand, within Psest_2990 at 3182.187 kb on - strand at 3182.201 kb on + strand at 3182.202 kb on - strand at 3182.202 kb on - strand at 3182.409 kb on - strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.590 kb on + strand, within Psest_2991 at 3182.591 kb on - strand, within Psest_2991 at 3182.722 kb on + strand, within Psest_2991 at 3182.722 kb on + strand, within Psest_2991 at 3182.723 kb on - strand, within Psest_2991 at 3182.723 kb on - strand, within Psest_2991 at 3182.894 kb on + strand, within Psest_2991 at 3183.295 kb on + strand, within Psest_2991 at 3183.296 kb on - strand, within Psest_2991 at 3183.298 kb on + strand, within Psest_2991 at 3183.526 kb on + strand at 3183.526 kb on + strand at 3183.526 kb on + strand at 3183.527 kb on - strand at 3183.527 kb on - strand at 3183.556 kb on + strand at 3183.556 kb on + strand at 3183.556 kb on + strand at 3183.557 kb on - strand at 3183.557 kb on - strand at 3183.557 kb on - strand at 3183.557 kb on - strand at 3183.557 kb on - strand at 3183.707 kb on + strand, within Psest_2992 at 3183.872 kb on - strand, within Psest_2992 at 3183.872 kb on - strand, within Psest_2992 at 3183.872 kb on - strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.874 kb on + strand, within Psest_2992 at 3183.875 kb on - strand, within Psest_2992 at 3183.875 kb on - strand, within Psest_2992 at 3183.875 kb on - strand, within Psest_2992 at 3184.016 kb on + strand at 3184.016 kb on + strand at 3184.016 kb on + strand at 3184.016 kb on + strand at 3184.017 kb on - strand at 3184.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,181,378 - Psest_2990 0.18 +0.0 3,181,378 - Psest_2990 0.18 -0.9 3,181,378 - Psest_2990 0.18 +0.9 3,181,496 + Psest_2990 0.30 +0.3 3,181,771 - Psest_2990 0.56 +0.5 3,181,798 + Psest_2990 0.59 +0.8 3,181,798 + Psest_2990 0.59 +1.0 3,181,799 - Psest_2990 0.59 -0.3 3,181,799 - Psest_2990 0.59 +0.6 3,181,799 - Psest_2990 0.59 -1.1 3,181,953 + Psest_2990 0.74 +2.2 3,181,954 - Psest_2990 0.74 +0.6 3,181,954 - Psest_2990 0.74 -0.6 3,181,954 - Psest_2990 0.74 +0.0 3,181,954 - Psest_2990 0.74 -0.1 3,181,954 - Psest_2990 0.74 -0.8 3,181,954 - Psest_2990 0.74 +0.9 3,181,954 - Psest_2990 0.74 +2.7 3,181,954 - Psest_2990 0.74 +0.8 3,181,954 - Psest_2990 0.74 +0.5 3,181,954 - Psest_2990 0.74 -0.9 3,181,954 - Psest_2990 0.74 -2.5 3,181,959 + Psest_2990 0.75 +0.3 3,181,959 + Psest_2990 0.75 -1.5 3,181,959 + Psest_2990 0.75 -0.9 3,181,959 + Psest_2990 0.75 +0.6 3,181,964 - Psest_2990 0.75 +0.3 3,181,964 - Psest_2990 0.75 -2.5 3,181,964 - Psest_2990 0.75 -2.6 3,181,986 + Psest_2990 0.77 +0.2 3,181,986 + Psest_2990 0.77 -0.4 3,181,986 + Psest_2990 0.77 -1.4 3,181,986 + Psest_2990 0.77 -3.4 3,181,986 + Psest_2990 0.77 -1.3 3,181,986 + Psest_2990 0.77 +0.2 3,181,986 + Psest_2990 0.77 +0.0 3,181,987 - Psest_2990 0.77 -2.3 3,181,987 - Psest_2990 0.77 -1.1 3,181,987 - Psest_2990 0.77 +1.2 3,182,035 + Psest_2990 0.82 +0.6 3,182,036 - Psest_2990 0.82 +0.6 3,182,036 - Psest_2990 0.82 -1.9 3,182,036 - Psest_2990 0.82 +2.1 3,182,036 - Psest_2990 0.82 -3.4 3,182,187 - -1.7 3,182,201 + -1.0 3,182,202 - +0.4 3,182,202 - -0.4 3,182,409 - Psest_2991 0.12 +1.7 3,182,590 + Psest_2991 0.26 +1.6 3,182,590 + Psest_2991 0.26 +0.6 3,182,590 + Psest_2991 0.26 +0.4 3,182,590 + Psest_2991 0.26 +2.7 3,182,590 + Psest_2991 0.26 +1.9 3,182,590 + Psest_2991 0.26 -0.3 3,182,590 + Psest_2991 0.26 +2.3 3,182,591 - Psest_2991 0.26 +0.6 3,182,722 + Psest_2991 0.37 +1.0 3,182,722 + Psest_2991 0.37 -1.5 3,182,723 - Psest_2991 0.37 -1.2 3,182,723 - Psest_2991 0.37 +1.4 3,182,894 + Psest_2991 0.51 +2.4 3,183,295 + Psest_2991 0.84 -0.8 3,183,296 - Psest_2991 0.84 +1.3 3,183,298 + Psest_2991 0.84 -1.3 3,183,526 + -0.9 3,183,526 + +1.2 3,183,526 + -0.2 3,183,527 - -3.2 3,183,527 - +1.7 3,183,556 + -0.4 3,183,556 + -2.2 3,183,556 + +1.7 3,183,557 - +0.2 3,183,557 - +1.2 3,183,557 - -2.1 3,183,557 - +1.1 3,183,557 - -1.3 3,183,707 + Psest_2992 0.32 +0.1 3,183,872 - Psest_2992 0.69 -0.1 3,183,872 - Psest_2992 0.69 +0.9 3,183,872 - Psest_2992 0.69 +1.3 3,183,874 + Psest_2992 0.70 -0.6 3,183,874 + Psest_2992 0.70 +0.9 3,183,874 + Psest_2992 0.70 +1.2 3,183,874 + Psest_2992 0.70 -0.8 3,183,874 + Psest_2992 0.70 +0.2 3,183,874 + Psest_2992 0.70 +1.2 3,183,875 - Psest_2992 0.70 -1.2 3,183,875 - Psest_2992 0.70 +0.4 3,183,875 - Psest_2992 0.70 +1.6 3,184,016 + -0.6 3,184,016 + +0.6 3,184,016 + +0.6 3,184,016 + +0.9 3,184,017 - +0.2 3,184,017 - -0.2
Or see this region's nucleotide sequence