Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2620 and Psest_2621 overlap by 7 nucleotides Psest_2621 and Psest_2622 overlap by 1 nucleotides Psest_2622 and Psest_2623 are separated by 11 nucleotides
Psest_2620: Psest_2620 - Flp pilus assembly protein, ATPase CpaE, at 2,803,028 to 2,804,257
_2620
Psest_2621: Psest_2621 - TadE-like protein., at 2,804,251 to 2,804,754
_2621
Psest_2622: Psest_2622 - TadE-like protein., at 2,804,754 to 2,805,224
_2622
Psest_2623: Psest_2623 - Flp pilus assembly protein TadG, at 2,805,236 to 2,806,570
_2623
Position (kb)
2804
2805
2806 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2804.401 kb on + strand, within Psest_2621 at 2804.401 kb on + strand, within Psest_2621 at 2804.401 kb on + strand, within Psest_2621 at 2804.401 kb on + strand, within Psest_2621 at 2804.401 kb on + strand, within Psest_2621 at 2804.402 kb on - strand, within Psest_2621 at 2804.402 kb on - strand, within Psest_2621 at 2804.402 kb on - strand, within Psest_2621 at 2804.402 kb on - strand, within Psest_2621 at 2804.429 kb on - strand, within Psest_2621 at 2804.481 kb on - strand, within Psest_2621 at 2804.481 kb on - strand, within Psest_2621 at 2804.857 kb on + strand, within Psest_2622 at 2804.858 kb on - strand, within Psest_2622 at 2804.858 kb on - strand, within Psest_2622 at 2804.968 kb on + strand, within Psest_2622 at 2804.968 kb on + strand, within Psest_2622 at 2804.968 kb on + strand, within Psest_2622 at 2804.969 kb on - strand, within Psest_2622 at 2805.250 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.274 kb on - strand at 2805.282 kb on + strand at 2805.282 kb on + strand at 2805.282 kb on + strand at 2805.282 kb on + strand at 2805.282 kb on + strand at 2805.283 kb on - strand at 2805.283 kb on - strand at 2805.332 kb on + strand at 2805.497 kb on + strand, within Psest_2623 at 2805.498 kb on - strand, within Psest_2623 at 2805.498 kb on - strand, within Psest_2623 at 2805.597 kb on + strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.599 kb on + strand, within Psest_2623 at 2805.747 kb on + strand, within Psest_2623 at 2805.747 kb on + strand, within Psest_2623 at 2805.748 kb on - strand, within Psest_2623 at 2805.748 kb on - strand, within Psest_2623 at 2806.008 kb on + strand, within Psest_2623 at 2806.008 kb on + strand, within Psest_2623 at 2806.009 kb on - strand, within Psest_2623 at 2806.009 kb on - strand, within Psest_2623 at 2806.016 kb on - strand, within Psest_2623 at 2806.121 kb on - strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.156 kb on - strand, within Psest_2623 at 2806.156 kb on - strand, within Psest_2623 at 2806.160 kb on - strand, within Psest_2623 at 2806.160 kb on - strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.179 kb on + strand, within Psest_2623 at 2806.179 kb on + strand, within Psest_2623 at 2806.180 kb on - strand, within Psest_2623 at 2806.180 kb on - strand, within Psest_2623 at 2806.180 kb on - strand, within Psest_2623
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,804,401 + Psest_2621 0.30 +2.1 2,804,401 + Psest_2621 0.30 -1.4 2,804,401 + Psest_2621 0.30 -2.8 2,804,401 + Psest_2621 0.30 +1.7 2,804,401 + Psest_2621 0.30 +0.0 2,804,402 - Psest_2621 0.30 -1.0 2,804,402 - Psest_2621 0.30 -1.0 2,804,402 - Psest_2621 0.30 -2.0 2,804,402 - Psest_2621 0.30 +1.4 2,804,429 - Psest_2621 0.35 +0.1 2,804,481 - Psest_2621 0.46 +0.5 2,804,481 - Psest_2621 0.46 +1.7 2,804,857 + Psest_2622 0.22 +0.5 2,804,858 - Psest_2622 0.22 +1.9 2,804,858 - Psest_2622 0.22 +2.2 2,804,968 + Psest_2622 0.45 +0.2 2,804,968 + Psest_2622 0.45 -0.8 2,804,968 + Psest_2622 0.45 -1.6 2,804,969 - Psest_2622 0.46 +0.4 2,805,250 + +2.0 2,805,273 + -0.5 2,805,273 + -1.5 2,805,273 + +1.6 2,805,273 + -0.8 2,805,273 + -0.5 2,805,273 + +0.6 2,805,273 + +0.8 2,805,273 + -0.5 2,805,273 + +0.5 2,805,273 + +1.0 2,805,274 - -0.5 2,805,274 - +0.7 2,805,274 - -1.1 2,805,274 - +0.9 2,805,274 - +1.4 2,805,274 - -0.5 2,805,274 - -1.3 2,805,274 - -0.8 2,805,274 - -0.2 2,805,274 - +0.8 2,805,274 - -1.3 2,805,274 - -0.4 2,805,274 - -0.7 2,805,274 - -0.0 2,805,274 - -0.1 2,805,282 + -0.9 2,805,282 + +2.7 2,805,282 + +1.8 2,805,282 + +0.7 2,805,282 + +1.2 2,805,283 - -0.5 2,805,283 - -0.5 2,805,332 + -2.5 2,805,497 + Psest_2623 0.20 +0.2 2,805,498 - Psest_2623 0.20 +1.7 2,805,498 - Psest_2623 0.20 +0.6 2,805,597 + Psest_2623 0.27 +2.0 2,805,598 - Psest_2623 0.27 -0.8 2,805,598 - Psest_2623 0.27 -1.5 2,805,598 - Psest_2623 0.27 -0.1 2,805,598 - Psest_2623 0.27 -0.1 2,805,599 + Psest_2623 0.27 -0.5 2,805,747 + Psest_2623 0.38 +2.2 2,805,747 + Psest_2623 0.38 +1.5 2,805,748 - Psest_2623 0.38 +1.1 2,805,748 - Psest_2623 0.38 +2.0 2,806,008 + Psest_2623 0.58 -0.8 2,806,008 + Psest_2623 0.58 +1.0 2,806,009 - Psest_2623 0.58 +1.2 2,806,009 - Psest_2623 0.58 -1.7 2,806,016 - Psest_2623 0.58 +1.0 2,806,121 - Psest_2623 0.66 -0.5 2,806,155 + Psest_2623 0.69 -0.5 2,806,155 + Psest_2623 0.69 -0.1 2,806,155 + Psest_2623 0.69 +0.4 2,806,155 + Psest_2623 0.69 -2.2 2,806,155 + Psest_2623 0.69 +1.6 2,806,156 - Psest_2623 0.69 -2.3 2,806,156 - Psest_2623 0.69 -3.4 2,806,160 - Psest_2623 0.69 -2.8 2,806,160 - Psest_2623 0.69 -0.4 2,806,175 + Psest_2623 0.70 +0.6 2,806,175 + Psest_2623 0.70 -0.4 2,806,175 + Psest_2623 0.70 -0.6 2,806,175 + Psest_2623 0.70 +0.6 2,806,175 + Psest_2623 0.70 -2.4 2,806,175 + Psest_2623 0.70 -0.4 2,806,175 + Psest_2623 0.70 -0.3 2,806,175 + Psest_2623 0.70 -2.0 2,806,176 - Psest_2623 0.70 +1.1 2,806,176 - Psest_2623 0.70 +2.6 2,806,176 - Psest_2623 0.70 +2.0 2,806,176 - Psest_2623 0.70 -2.0 2,806,176 - Psest_2623 0.70 +2.4 2,806,176 - Psest_2623 0.70 +0.9 2,806,176 - Psest_2623 0.70 -0.6 2,806,176 - Psest_2623 0.70 -1.3 2,806,179 + Psest_2623 0.71 -1.0 2,806,179 + Psest_2623 0.71 -2.3 2,806,180 - Psest_2623 0.71 +0.2 2,806,180 - Psest_2623 0.71 +2.5 2,806,180 - Psest_2623 0.71 -0.3
Or see this region's nucleotide sequence