Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2456 and Psest_2457 overlap by 4 nucleotides Psest_2457 and Psest_2458 are separated by 34 nucleotides
Psest_2456: Psest_2456 - Transglutaminase-like enzymes, putative cysteine proteases, at 2,624,649 to 2,626,649
_2456
Psest_2457: Psest_2457 - Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain), at 2,626,646 to 2,627,608
_2457
Psest_2458: Psest_2458 - MoxR-like ATPases, at 2,627,643 to 2,628,560
_2458
Position (kb)
2626
2627
2628 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2625.697 kb on + strand, within Psest_2456 at 2625.697 kb on + strand, within Psest_2456 at 2625.833 kb on - strand, within Psest_2456 at 2625.890 kb on - strand, within Psest_2456 at 2625.890 kb on - strand, within Psest_2456 at 2625.890 kb on - strand, within Psest_2456 at 2625.890 kb on - strand, within Psest_2456 at 2625.890 kb on - strand, within Psest_2456 at 2625.890 kb on - strand, within Psest_2456 at 2625.943 kb on + strand, within Psest_2456 at 2625.944 kb on - strand, within Psest_2456 at 2625.944 kb on - strand, within Psest_2456 at 2626.254 kb on - strand, within Psest_2456 at 2626.254 kb on - strand, within Psest_2456 at 2626.254 kb on - strand, within Psest_2456 at 2626.256 kb on - strand, within Psest_2456 at 2626.256 kb on - strand, within Psest_2456 at 2626.288 kb on + strand, within Psest_2456 at 2626.289 kb on - strand, within Psest_2456 at 2626.289 kb on - strand, within Psest_2456 at 2626.289 kb on - strand, within Psest_2456 at 2626.433 kb on - strand, within Psest_2456 at 2626.433 kb on - strand, within Psest_2456 at 2626.912 kb on - strand, within Psest_2457 at 2626.972 kb on - strand, within Psest_2457 at 2627.067 kb on + strand, within Psest_2457 at 2627.271 kb on + strand, within Psest_2457 at 2627.272 kb on - strand, within Psest_2457 at 2627.400 kb on + strand, within Psest_2457 at 2627.401 kb on - strand, within Psest_2457 at 2627.448 kb on + strand, within Psest_2457 at 2627.449 kb on - strand, within Psest_2457 at 2627.600 kb on + strand at 2627.600 kb on + strand at 2627.601 kb on - strand at 2627.601 kb on - strand at 2627.609 kb on - strand at 2627.899 kb on + strand, within Psest_2458 at 2627.899 kb on + strand, within Psest_2458 at 2627.899 kb on + strand, within Psest_2458 at 2627.900 kb on - strand, within Psest_2458 at 2628.408 kb on - strand, within Psest_2458 at 2628.591 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,625,697 + Psest_2456 0.52 +2.0 2,625,697 + Psest_2456 0.52 +1.0 2,625,833 - Psest_2456 0.59 +0.6 2,625,890 - Psest_2456 0.62 +0.2 2,625,890 - Psest_2456 0.62 +2.0 2,625,890 - Psest_2456 0.62 +0.1 2,625,890 - Psest_2456 0.62 -3.8 2,625,890 - Psest_2456 0.62 +2.7 2,625,890 - Psest_2456 0.62 +0.0 2,625,943 + Psest_2456 0.65 +0.8 2,625,944 - Psest_2456 0.65 +1.1 2,625,944 - Psest_2456 0.65 -1.7 2,626,254 - Psest_2456 0.80 +0.3 2,626,254 - Psest_2456 0.80 +0.4 2,626,254 - Psest_2456 0.80 +1.3 2,626,256 - Psest_2456 0.80 +0.1 2,626,256 - Psest_2456 0.80 -0.1 2,626,288 + Psest_2456 0.82 -0.2 2,626,289 - Psest_2456 0.82 +0.4 2,626,289 - Psest_2456 0.82 -0.0 2,626,289 - Psest_2456 0.82 +1.4 2,626,433 - Psest_2456 0.89 -2.3 2,626,433 - Psest_2456 0.89 +0.9 2,626,912 - Psest_2457 0.28 +0.9 2,626,972 - Psest_2457 0.34 +1.4 2,627,067 + Psest_2457 0.44 +1.3 2,627,271 + Psest_2457 0.65 +2.4 2,627,272 - Psest_2457 0.65 -1.0 2,627,400 + Psest_2457 0.78 -0.2 2,627,401 - Psest_2457 0.78 -0.7 2,627,448 + Psest_2457 0.83 +2.1 2,627,449 - Psest_2457 0.83 +0.8 2,627,600 + +0.8 2,627,600 + -1.3 2,627,601 - +0.1 2,627,601 - +0.7 2,627,609 - -0.2 2,627,899 + Psest_2458 0.28 -0.5 2,627,899 + Psest_2458 0.28 +0.3 2,627,899 + Psest_2458 0.28 -0.0 2,627,900 - Psest_2458 0.28 -0.3 2,628,408 - Psest_2458 0.83 +1.4 2,628,591 + -2.2
Or see this region's nucleotide sequence