Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2214 and Psest_2215 are separated by 51 nucleotides Psest_2215 and Psest_2216 are separated by 259 nucleotides Psest_2216 and Psest_2217 are separated by 9 nucleotides
Psest_2214: Psest_2214 - hypothetical protein, at 2,364,847 to 2,365,149
_2214
Psest_2215: Psest_2215 - hypothetical protein, at 2,365,201 to 2,365,485
_2215
Psest_2216: Psest_2216 - Acyl carrier protein, at 2,365,745 to 2,365,996
_2216
Psest_2217: Psest_2217 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes, at 2,366,006 to 2,367,154
_2217
Position (kb)
2365
2366 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2365.647 kb on + strand at 2365.647 kb on + strand at 2365.648 kb on - strand at 2365.747 kb on - strand at 2365.774 kb on - strand, within Psest_2216 at 2365.809 kb on + strand, within Psest_2216 at 2365.856 kb on + strand, within Psest_2216 at 2365.857 kb on - strand, within Psest_2216 at 2365.860 kb on + strand, within Psest_2216 at 2365.928 kb on + strand, within Psest_2216 at 2365.928 kb on + strand, within Psest_2216 at 2366.103 kb on - strand at 2366.103 kb on - strand at 2366.174 kb on + strand, within Psest_2217 at 2366.174 kb on + strand, within Psest_2217 at 2366.174 kb on + strand, within Psest_2217 at 2366.175 kb on - strand, within Psest_2217 at 2366.197 kb on - strand, within Psest_2217 at 2366.451 kb on + strand, within Psest_2217 at 2366.507 kb on + strand, within Psest_2217 at 2366.508 kb on - strand, within Psest_2217 at 2366.508 kb on - strand, within Psest_2217 at 2366.550 kb on + strand, within Psest_2217 at 2366.550 kb on + strand, within Psest_2217 at 2366.601 kb on + strand, within Psest_2217 at 2366.601 kb on + strand, within Psest_2217 at 2366.602 kb on - strand, within Psest_2217 at 2366.602 kb on - strand, within Psest_2217
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,365,647 + -1.2 2,365,647 + -1.3 2,365,648 - -0.4 2,365,747 - +2.4 2,365,774 - Psest_2216 0.12 +0.7 2,365,809 + Psest_2216 0.25 -3.3 2,365,856 + Psest_2216 0.44 +2.1 2,365,857 - Psest_2216 0.44 +2.1 2,365,860 + Psest_2216 0.46 +1.3 2,365,928 + Psest_2216 0.73 -1.4 2,365,928 + Psest_2216 0.73 +0.7 2,366,103 - -0.7 2,366,103 - -0.5 2,366,174 + Psest_2217 0.15 -1.5 2,366,174 + Psest_2217 0.15 +1.6 2,366,174 + Psest_2217 0.15 -0.9 2,366,175 - Psest_2217 0.15 -0.7 2,366,197 - Psest_2217 0.17 -2.5 2,366,451 + Psest_2217 0.39 +1.9 2,366,507 + Psest_2217 0.44 +0.7 2,366,508 - Psest_2217 0.44 +1.4 2,366,508 - Psest_2217 0.44 -0.3 2,366,550 + Psest_2217 0.47 +2.4 2,366,550 + Psest_2217 0.47 -0.7 2,366,601 + Psest_2217 0.52 -0.1 2,366,601 + Psest_2217 0.52 -2.1 2,366,602 - Psest_2217 0.52 -0.6 2,366,602 - Psest_2217 0.52 +1.2
Or see this region's nucleotide sequence