Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2174 and Psest_2175 are separated by 236 nucleotides Psest_2175 and Psest_2176 are separated by 102 nucleotides Psest_2176 and Psest_2177 are separated by 11 nucleotides Psest_2177 and Psest_2178 are separated by 270 nucleotides Psest_2178 and Psest_2179 are separated by 30 nucleotides
Psest_2174: Psest_2174 - Small-conductance mechanosensitive channel, at 2,331,173 to 2,332,252
_2174
Psest_2175: Psest_2175 - Uncharacterized protein conserved in bacteria, at 2,332,489 to 2,333,019
_2175
Psest_2176: Psest_2176 - Predicted membrane protein, at 2,333,122 to 2,333,406
_2176
Psest_2177: Psest_2177 - Protein of unknown function (DUF1652)., at 2,333,418 to 2,333,693
_2177
Psest_2178: Psest_2178 - hypothetical protein, at 2,333,964 to 2,334,260
_2178
Psest_2179: Psest_2179 - DNA ligase D, at 2,334,291 to 2,336,855
_2179
Position (kb)
2333
2334 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.269 kb on + strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.270 kb on - strand at 2332.454 kb on - strand at 2332.616 kb on - strand, within Psest_2175 at 2332.616 kb on - strand, within Psest_2175 at 2332.814 kb on - strand, within Psest_2175 at 2332.814 kb on - strand, within Psest_2175 at 2332.817 kb on + strand, within Psest_2175 at 2332.843 kb on + strand, within Psest_2175 at 2332.843 kb on + strand, within Psest_2175 at 2332.843 kb on + strand, within Psest_2175 at 2332.843 kb on + strand, within Psest_2175 at 2332.843 kb on + strand, within Psest_2175 at 2332.844 kb on - strand, within Psest_2175 at 2332.844 kb on - strand, within Psest_2175 at 2332.844 kb on - strand, within Psest_2175 at 2332.898 kb on + strand, within Psest_2175 at 2332.898 kb on + strand, within Psest_2175 at 2332.898 kb on + strand, within Psest_2175 at 2332.898 kb on + strand, within Psest_2175 at 2332.898 kb on + strand, within Psest_2175 at 2332.898 kb on + strand, within Psest_2175 at 2332.899 kb on - strand, within Psest_2175 at 2332.975 kb on + strand at 2332.975 kb on + strand at 2333.211 kb on + strand, within Psest_2176 at 2333.211 kb on + strand, within Psest_2176 at 2333.211 kb on + strand, within Psest_2176 at 2333.211 kb on + strand, within Psest_2176 at 2333.219 kb on + strand, within Psest_2176 at 2333.220 kb on - strand, within Psest_2176 at 2333.220 kb on - strand, within Psest_2176 at 2333.269 kb on + strand, within Psest_2176 at 2333.269 kb on + strand, within Psest_2176 at 2333.269 kb on + strand, within Psest_2176 at 2333.270 kb on - strand, within Psest_2176 at 2333.353 kb on + strand, within Psest_2176 at 2333.353 kb on + strand, within Psest_2176 at 2333.354 kb on - strand, within Psest_2176 at 2333.354 kb on - strand, within Psest_2176 at 2333.354 kb on - strand, within Psest_2176 at 2333.354 kb on - strand, within Psest_2176 at 2333.354 kb on - strand, within Psest_2176 at 2333.354 kb on - strand, within Psest_2176 at 2333.537 kb on - strand, within Psest_2177 at 2333.644 kb on + strand, within Psest_2177 at 2333.644 kb on + strand, within Psest_2177 at 2333.645 kb on - strand, within Psest_2177 at 2333.645 kb on - strand, within Psest_2177 at 2333.645 kb on - strand, within Psest_2177 at 2333.645 kb on - strand, within Psest_2177 at 2333.645 kb on - strand, within Psest_2177 at 2333.645 kb on - strand, within Psest_2177 at 2333.687 kb on + strand at 2333.693 kb on + strand at 2333.693 kb on + strand at 2333.693 kb on + strand at 2333.694 kb on - strand at 2333.694 kb on - strand at 2333.709 kb on - strand at 2333.776 kb on - strand at 2333.795 kb on + strand at 2333.795 kb on + strand at 2333.795 kb on + strand at 2333.796 kb on - strand at 2333.807 kb on + strand at 2333.808 kb on - strand at 2333.808 kb on - strand at 2333.843 kb on + strand at 2333.844 kb on - strand at 2333.916 kb on - strand at 2333.937 kb on + strand at 2333.937 kb on + strand at 2333.937 kb on + strand at 2333.937 kb on + strand at 2333.937 kb on + strand at 2333.937 kb on + strand at 2333.937 kb on + strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.938 kb on - strand at 2333.941 kb on + strand at 2333.941 kb on + strand at 2333.942 kb on - strand at 2333.942 kb on - strand at 2333.942 kb on - strand at 2333.944 kb on + strand at 2333.944 kb on + strand at 2333.944 kb on + strand at 2333.944 kb on + strand at 2333.945 kb on - strand at 2334.259 kb on - strand at 2334.307 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,332,269 + -0.5 2,332,269 + +2.1 2,332,269 + +0.3 2,332,269 + -1.4 2,332,269 + +1.6 2,332,269 + -0.7 2,332,269 + -1.7 2,332,269 + -1.0 2,332,269 + +1.9 2,332,269 + -0.2 2,332,269 + -1.1 2,332,269 + +0.7 2,332,269 + +0.5 2,332,270 - -0.7 2,332,270 - -1.8 2,332,270 - -2.9 2,332,270 - +1.3 2,332,270 - +0.6 2,332,270 - +0.9 2,332,270 - +0.3 2,332,270 - -0.1 2,332,454 - +1.5 2,332,616 - Psest_2175 0.24 -0.0 2,332,616 - Psest_2175 0.24 +0.8 2,332,814 - Psest_2175 0.61 +0.7 2,332,814 - Psest_2175 0.61 -2.3 2,332,817 + Psest_2175 0.62 +0.9 2,332,843 + Psest_2175 0.67 +0.6 2,332,843 + Psest_2175 0.67 -0.1 2,332,843 + Psest_2175 0.67 +0.7 2,332,843 + Psest_2175 0.67 -2.0 2,332,843 + Psest_2175 0.67 -1.1 2,332,844 - Psest_2175 0.67 +0.0 2,332,844 - Psest_2175 0.67 +1.9 2,332,844 - Psest_2175 0.67 +0.2 2,332,898 + Psest_2175 0.77 +0.6 2,332,898 + Psest_2175 0.77 +0.9 2,332,898 + Psest_2175 0.77 +1.6 2,332,898 + Psest_2175 0.77 +0.7 2,332,898 + Psest_2175 0.77 +1.8 2,332,898 + Psest_2175 0.77 -0.5 2,332,899 - Psest_2175 0.77 +0.0 2,332,975 + +0.2 2,332,975 + -0.1 2,333,211 + Psest_2176 0.31 -2.2 2,333,211 + Psest_2176 0.31 +0.7 2,333,211 + Psest_2176 0.31 +0.8 2,333,211 + Psest_2176 0.31 -2.5 2,333,219 + Psest_2176 0.34 +0.9 2,333,220 - Psest_2176 0.34 -0.1 2,333,220 - Psest_2176 0.34 +2.1 2,333,269 + Psest_2176 0.52 -0.7 2,333,269 + Psest_2176 0.52 +0.1 2,333,269 + Psest_2176 0.52 +1.0 2,333,270 - Psest_2176 0.52 +1.6 2,333,353 + Psest_2176 0.81 -0.8 2,333,353 + Psest_2176 0.81 +0.5 2,333,354 - Psest_2176 0.81 +1.8 2,333,354 - Psest_2176 0.81 -0.4 2,333,354 - Psest_2176 0.81 +2.0 2,333,354 - Psest_2176 0.81 +0.5 2,333,354 - Psest_2176 0.81 +2.1 2,333,354 - Psest_2176 0.81 -2.4 2,333,537 - Psest_2177 0.43 +0.0 2,333,644 + Psest_2177 0.82 +0.9 2,333,644 + Psest_2177 0.82 +1.6 2,333,645 - Psest_2177 0.82 +0.2 2,333,645 - Psest_2177 0.82 +1.3 2,333,645 - Psest_2177 0.82 -2.2 2,333,645 - Psest_2177 0.82 -2.5 2,333,645 - Psest_2177 0.82 -0.8 2,333,645 - Psest_2177 0.82 -2.0 2,333,687 + +0.3 2,333,693 + +1.7 2,333,693 + +1.9 2,333,693 + -1.1 2,333,694 - -0.1 2,333,694 - -0.8 2,333,709 - -1.2 2,333,776 - +1.6 2,333,795 + +0.9 2,333,795 + +0.4 2,333,795 + -0.2 2,333,796 - -2.1 2,333,807 + +0.5 2,333,808 - +1.3 2,333,808 - -1.2 2,333,843 + +0.3 2,333,844 - -1.1 2,333,916 - -0.1 2,333,937 + +0.3 2,333,937 + -4.0 2,333,937 + -2.0 2,333,937 + -0.2 2,333,937 + -2.3 2,333,937 + +0.2 2,333,937 + +0.3 2,333,938 - +1.1 2,333,938 - -0.8 2,333,938 - +1.1 2,333,938 - -0.4 2,333,938 - +0.8 2,333,938 - +3.1 2,333,938 - -0.0 2,333,938 - -0.7 2,333,938 - +2.3 2,333,938 - -0.8 2,333,941 + -0.0 2,333,941 + +2.5 2,333,942 - -2.9 2,333,942 - +0.1 2,333,942 - -0.5 2,333,944 + -0.5 2,333,944 + +0.6 2,333,944 + +1.7 2,333,944 + -0.4 2,333,945 - -0.1 2,334,259 - +1.2 2,334,307 - -1.4
Or see this region's nucleotide sequence