Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3923

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
4,089,861	+		Psest_3921	0.89	+1.0
4,089,862	-		Psest_3921	0.89	-0.1
4,089,862	-		Psest_3921	0.89	-0.5
4,089,910	-				+0.3
4,089,966	-				-1.4
4,090,104	-		Psest_3922	0.14	-0.4
4,090,123	+		Psest_3922	0.17	+0.2
4,090,124	-		Psest_3922	0.17	-0.3
4,090,124	-		Psest_3922	0.17	-0.1
4,090,124	-		Psest_3922	0.17	-0.4
4,090,415	-		Psest_3922	0.57	-0.8
4,090,549	+		Psest_3922	0.76	-2.3
4,090,550	-		Psest_3922	0.76	-2.1
4,090,550	-		Psest_3922	0.76	-0.9
4,090,657	+				-0.1
4,090,657	+				-1.3
4,090,658	-				-0.9
4,090,968	+		Psest_3923	0.15	-0.5
4,090,969	-		Psest_3923	0.15	-0.2
4,091,238	+		Psest_3923	0.32	-0.4
4,091,538	+		Psest_3923	0.51	+0.6
4,091,709	+		Psest_3923	0.62	-0.9
4,091,710	-		Psest_3923	0.62	-1.8
4,091,710	-		Psest_3923	0.62	-0.1
4,091,710	-		Psest_3923	0.62	-1.4
4,091,741	-		Psest_3923	0.64	-1.0
4,091,741	-		Psest_3923	0.64	-1.0
4,091,741	-		Psest_3923	0.64	-0.9
4,091,742	+		Psest_3923	0.64	-0.4
4,091,742	+		Psest_3923	0.64	-0.7
4,091,742	+		Psest_3923	0.64	+0.1
4,091,742	+		Psest_3923	0.64	-0.3
4,091,742	+		Psest_3923	0.64	+1.0
4,091,742	+		Psest_3923	0.64	-1.4
4,091,743	-		Psest_3923	0.64	-1.9
4,091,743	-		Psest_3923	0.64	-1.3
4,091,792	+		Psest_3923	0.67	-0.4
4,091,792	+		Psest_3923	0.67	-1.5
4,091,793	-		Psest_3923	0.67	-0.3
4,091,793	-		Psest_3923	0.67	-1.7
4,091,793	-		Psest_3923	0.67	-0.8
4,091,918	-		Psest_3923	0.75	-0.3
4,091,952	+		Psest_3923	0.77	-0.9
4,091,953	-		Psest_3923	0.77	+0.2
4,091,953	-		Psest_3923	0.77	+0.1
4,091,953	-		Psest_3923	0.77	-0.0
4,091,953	-		Psest_3923	0.77	-1.1
4,091,953	-		Psest_3923	0.77	+0.6
4,091,953	-		Psest_3923	0.77	-0.3
4,091,953	-		Psest_3923	0.77	-0.6
4,091,953	-		Psest_3923	0.77	-1.4
4,091,953	-		Psest_3923	0.77	-0.6
4,092,448	-				-0.6
4,092,484	+				+0.3
4,092,489	+				+0.7
4,092,490	-				-0.5
4,092,569	+				-1.6
4,092,569	+				-0.5
4,092,569	+				-2.6
4,092,569	+				-0.8
4,092,569	+				-1.3
4,092,569	+				-0.6
4,092,569	+				-0.8
4,092,569	+				-1.7
4,092,569	+				-1.1
4,092,569	+				-0.4
4,092,570	-				-0.9
4,092,570	-				-0.6
4,092,570	-				-1.5
4,092,570	-				-0.2
4,092,713	+		Psest_3924	0.10	+0.9
4,092,793	+		Psest_3924	0.17	-0.8
4,092,794	-		Psest_3924	0.17	-0.6
4,092,810	+		Psest_3924	0.18	-1.4
4,092,810	+		Psest_3924	0.18	-0.7
4,092,811	-		Psest_3924	0.18	-0.9
4,092,861	+		Psest_3924	0.22	-0.8
4,092,861	+		Psest_3924	0.22	-0.7
4,092,861	+		Psest_3924	0.22	-1.4
4,092,861	+		Psest_3924	0.22	-3.0
4,092,861	+		Psest_3924	0.22	-1.3
4,092,862	-		Psest_3924	0.22	-0.3
4,092,936	+		Psest_3924	0.27	-1.0
4,092,936	+		Psest_3924	0.27	-2.1
4,092,936	+		Psest_3924	0.27	-2.4
4,092,936	+		Psest_3924	0.27	-0.5
4,092,936	+		Psest_3924	0.27	-0.9
4,092,936	+		Psest_3924	0.27	-0.8
4,092,936	+		Psest_3924	0.27	-1.0
4,092,936	+		Psest_3924	0.27	+0.2
4,092,936	+		Psest_3924	0.27	-2.1
4,092,936	+		Psest_3924	0.27	-1.3
4,092,936	+		Psest_3924	0.27	-0.3
4,092,936	+		Psest_3924	0.27	-0.7
4,092,936	+		Psest_3924	0.27	-0.8
4,092,936	+		Psest_3924	0.27	-1.3
4,092,936	+		Psest_3924	0.27	-1.1
4,092,936	+		Psest_3924	0.27	-1.9
4,092,936	+		Psest_3924	0.27	+0.1
4,092,936	+		Psest_3924	0.27	-1.0
4,092,937	-		Psest_3924	0.27	-2.2
4,092,937	-		Psest_3924	0.27	-1.4
4,092,937	-		Psest_3924	0.27	-0.2
4,092,937	-		Psest_3924	0.27	-1.6
4,092,937	-		Psest_3924	0.27	-0.7
4,092,937	-		Psest_3924	0.27	-1.2
4,092,937	-		Psest_3924	0.27	-1.3
4,092,937	-		Psest_3924	0.27	-1.3
4,092,937	-		Psest_3924	0.27	+0.3
4,092,937	-		Psest_3924	0.27	-1.2
4,092,937	-		Psest_3924	0.27	-1.6
4,092,937	-		Psest_3924	0.27	-0.2
4,092,937	-		Psest_3924	0.27	-0.5
4,092,937	-		Psest_3924	0.27	-0.3
4,092,937	-		Psest_3924	0.27	-1.1
4,092,937	-		Psest_3924	0.27	-1.5
4,092,937	-		Psest_3924	0.27	-0.1
4,092,937	-		Psest_3924	0.27	-0.5
4,092,937	-		Psest_3924	0.27	-2.4
4,093,167	+		Psest_3924	0.45	-0.9
4,093,167	+		Psest_3924	0.45	-1.3
4,093,167	+		Psest_3924	0.45	-0.6
4,093,167	+		Psest_3924	0.45	-2.5
4,093,197	+		Psest_3924	0.47	-1.4
4,093,197	+		Psest_3924	0.47	-0.4
4,093,197	+		Psest_3924	0.47	-1.6
4,093,197	+		Psest_3924	0.47	-0.9
4,093,200	+		Psest_3924	0.47	-2.4
4,093,200	+		Psest_3924	0.47	-0.9
4,093,200	+		Psest_3924	0.47	-1.8
4,093,200	+		Psest_3924	0.47	-1.9
4,093,200	+		Psest_3924	0.47	-0.7
4,093,200	+		Psest_3924	0.47	-0.5
4,093,200	+		Psest_3924	0.47	-2.3
4,093,200	+		Psest_3924	0.47	-1.3
4,093,200	+		Psest_3924	0.47	-0.1
4,093,200	+		Psest_3924	0.47	-1.9
4,093,200	+		Psest_3924	0.47	-1.6
4,093,200	+		Psest_3924	0.47	+0.7
4,093,200	+		Psest_3924	0.47	-1.5
4,093,200	+		Psest_3924	0.47	-1.2
4,093,200	+		Psest_3924	0.47	-1.7
4,093,200	+		Psest_3924	0.47	-1.7
4,093,201	-		Psest_3924	0.48	-2.1
4,093,201	-		Psest_3924	0.48	-1.3
4,093,201	-		Psest_3924	0.48	-0.3
4,093,201	-		Psest_3924	0.48	-0.3
4,093,201	-		Psest_3924	0.48	-0.1
4,093,201	-		Psest_3924	0.48	-1.5
4,093,201	-		Psest_3924	0.48	-0.3
4,093,201	-		Psest_3924	0.48	-3.2
4,093,201	-		Psest_3924	0.48	-2.4
4,093,201	-		Psest_3924	0.48	-1.1
4,093,201	-		Psest_3924	0.48	-1.1
4,093,201	-		Psest_3924	0.48	-1.0
4,093,201	-		Psest_3924	0.48	-1.4
4,093,201	-		Psest_3924	0.48	-0.4
4,093,201	-		Psest_3924	0.48	-0.0
4,093,201	-		Psest_3924	0.48	-0.0
4,093,280	+		Psest_3924	0.54	-0.1