Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3432 and Psest_3433 are separated by 147 nucleotides Psest_3433 and Psest_3434 are separated by 159 nucleotides
Psest_3432: Psest_3432 - Site-specific recombinase XerD, at 3,600,535 to 3,601,800
_3432
Psest_3433: Psest_3433 - ATP-binding cassette protein, ChvD family, at 3,601,948 to 3,603,642
_3433
Psest_3434: Psest_3434 - Serine phosphatase RsbU, regulator of sigma subunit, at 3,603,802 to 3,605,793
_3434
Position (kb)
3601
3602
3603
3604 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3600.959 kb on + strand, within Psest_3432 at 3600.960 kb on - strand, within Psest_3432 at 3600.971 kb on + strand, within Psest_3432 at 3600.989 kb on + strand, within Psest_3432 at 3601.087 kb on + strand, within Psest_3432 at 3601.087 kb on + strand, within Psest_3432 at 3601.181 kb on + strand, within Psest_3432 at 3601.181 kb on + strand, within Psest_3432 at 3601.181 kb on + strand, within Psest_3432 at 3601.181 kb on + strand, within Psest_3432 at 3601.181 kb on + strand, within Psest_3432 at 3601.182 kb on - strand, within Psest_3432 at 3601.182 kb on - strand, within Psest_3432 at 3601.182 kb on - strand, within Psest_3432 at 3601.182 kb on - strand, within Psest_3432 at 3601.182 kb on - strand, within Psest_3432 at 3601.185 kb on + strand, within Psest_3432 at 3601.185 kb on + strand, within Psest_3432 at 3601.185 kb on + strand, within Psest_3432 at 3601.185 kb on + strand, within Psest_3432 at 3601.370 kb on + strand, within Psest_3432 at 3601.370 kb on + strand, within Psest_3432 at 3601.401 kb on - strand, within Psest_3432 at 3601.469 kb on + strand, within Psest_3432 at 3601.499 kb on + strand, within Psest_3432 at 3601.500 kb on - strand, within Psest_3432 at 3601.571 kb on + strand, within Psest_3432 at 3601.572 kb on - strand, within Psest_3432 at 3601.614 kb on + strand, within Psest_3432 at 3601.614 kb on + strand, within Psest_3432 at 3601.628 kb on - strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.648 kb on + strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.649 kb on - strand, within Psest_3432 at 3601.661 kb on + strand, within Psest_3432 at 3601.662 kb on - strand, within Psest_3432 at 3601.662 kb on - strand, within Psest_3432 at 3601.662 kb on - strand, within Psest_3432 at 3601.662 kb on - strand, within Psest_3432 at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.709 kb on + strand at 3601.724 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.736 kb on + strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.737 kb on - strand at 3601.750 kb on + strand at 3601.750 kb on + strand at 3601.751 kb on - strand at 3601.783 kb on + strand at 3601.910 kb on - strand at 3601.984 kb on + strand at 3601.985 kb on - strand at 3601.991 kb on - strand at 3602.632 kb on + strand, within Psest_3433 at 3602.632 kb on + strand, within Psest_3433 at 3602.693 kb on - strand, within Psest_3433 at 3602.704 kb on + strand, within Psest_3433 at 3602.704 kb on + strand, within Psest_3433 at 3602.704 kb on + strand, within Psest_3433 at 3602.704 kb on + strand, within Psest_3433 at 3602.704 kb on + strand, within Psest_3433 at 3602.705 kb on - strand, within Psest_3433 at 3602.705 kb on - strand, within Psest_3433 at 3602.705 kb on - strand, within Psest_3433 at 3602.908 kb on + strand, within Psest_3433 at 3602.908 kb on + strand, within Psest_3433 at 3602.908 kb on + strand, within Psest_3433 at 3602.909 kb on - strand, within Psest_3433 at 3602.909 kb on - strand, within Psest_3433 at 3602.909 kb on - strand, within Psest_3433 at 3602.909 kb on - strand, within Psest_3433 at 3602.909 kb on - strand, within Psest_3433 at 3603.232 kb on + strand, within Psest_3433 at 3603.232 kb on + strand, within Psest_3433 at 3603.233 kb on - strand, within Psest_3433 at 3603.233 kb on - strand, within Psest_3433 at 3603.233 kb on - strand, within Psest_3433 at 3603.514 kb on + strand at 3603.515 kb on - strand at 3603.515 kb on - strand at 3603.553 kb on + strand at 3603.553 kb on + strand at 3603.553 kb on + strand at 3603.554 kb on - strand at 3603.554 kb on - strand at 3603.554 kb on - strand at 3603.562 kb on + strand at 3603.562 kb on + strand at 3603.563 kb on - strand at 3603.623 kb on - strand at 3603.623 kb on - strand at 3603.782 kb on - strand at 3603.948 kb on - strand at 3604.123 kb on + strand, within Psest_3434 at 3604.123 kb on + strand, within Psest_3434 at 3604.123 kb on + strand, within Psest_3434 at 3604.123 kb on + strand, within Psest_3434 at 3604.123 kb on + strand, within Psest_3434 at 3604.124 kb on - strand, within Psest_3434 at 3604.124 kb on - strand, within Psest_3434 at 3604.124 kb on - strand, within Psest_3434 at 3604.124 kb on - strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.153 kb on + strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.154 kb on - strand, within Psest_3434 at 3604.238 kb on - strand, within Psest_3434 at 3604.310 kb on + strand, within Psest_3434 at 3604.311 kb on - strand, within Psest_3434 at 3604.311 kb on - strand, within Psest_3434 at 3604.311 kb on - strand, within Psest_3434 at 3604.311 kb on - strand, within Psest_3434 at 3604.311 kb on - strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.349 kb on + strand, within Psest_3434 at 3604.350 kb on - strand, within Psest_3434 at 3604.350 kb on - strand, within Psest_3434 at 3604.350 kb on - strand, within Psest_3434 at 3604.350 kb on - strand, within Psest_3434 at 3604.350 kb on - strand, within Psest_3434 at 3604.517 kb on + strand, within Psest_3434
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,600,959 + Psest_3432 0.33 +0.9 3,600,960 - Psest_3432 0.34 +0.1 3,600,971 + Psest_3432 0.34 -0.3 3,600,989 + Psest_3432 0.36 -0.1 3,601,087 + Psest_3432 0.44 +0.2 3,601,087 + Psest_3432 0.44 +0.8 3,601,181 + Psest_3432 0.51 +0.2 3,601,181 + Psest_3432 0.51 +0.1 3,601,181 + Psest_3432 0.51 -2.0 3,601,181 + Psest_3432 0.51 +0.3 3,601,181 + Psest_3432 0.51 -1.0 3,601,182 - Psest_3432 0.51 -0.2 3,601,182 - Psest_3432 0.51 +0.1 3,601,182 - Psest_3432 0.51 +0.7 3,601,182 - Psest_3432 0.51 +0.6 3,601,182 - Psest_3432 0.51 +0.8 3,601,185 + Psest_3432 0.51 -0.1 3,601,185 + Psest_3432 0.51 +2.1 3,601,185 + Psest_3432 0.51 -0.0 3,601,185 + Psest_3432 0.51 +0.9 3,601,370 + Psest_3432 0.66 -0.9 3,601,370 + Psest_3432 0.66 -0.1 3,601,401 - Psest_3432 0.68 +0.9 3,601,469 + Psest_3432 0.74 +0.9 3,601,499 + Psest_3432 0.76 +0.3 3,601,500 - Psest_3432 0.76 +2.4 3,601,571 + Psest_3432 0.82 -0.7 3,601,572 - Psest_3432 0.82 +0.3 3,601,614 + Psest_3432 0.85 -0.7 3,601,614 + Psest_3432 0.85 -0.9 3,601,628 - Psest_3432 0.86 +0.5 3,601,648 + Psest_3432 0.88 +0.3 3,601,648 + Psest_3432 0.88 -0.6 3,601,648 + Psest_3432 0.88 +0.3 3,601,648 + Psest_3432 0.88 -2.6 3,601,648 + Psest_3432 0.88 -0.0 3,601,648 + Psest_3432 0.88 +1.7 3,601,648 + Psest_3432 0.88 -0.4 3,601,648 + Psest_3432 0.88 -1.6 3,601,649 - Psest_3432 0.88 +0.0 3,601,649 - Psest_3432 0.88 +1.1 3,601,649 - Psest_3432 0.88 +1.1 3,601,649 - Psest_3432 0.88 +0.6 3,601,649 - Psest_3432 0.88 +1.5 3,601,649 - Psest_3432 0.88 +0.5 3,601,649 - Psest_3432 0.88 +0.2 3,601,649 - Psest_3432 0.88 +0.4 3,601,661 + Psest_3432 0.89 +0.9 3,601,662 - Psest_3432 0.89 +0.3 3,601,662 - Psest_3432 0.89 +0.5 3,601,662 - Psest_3432 0.89 +1.1 3,601,662 - Psest_3432 0.89 +0.5 3,601,709 + -0.6 3,601,709 + -0.5 3,601,709 + +0.1 3,601,709 + -0.3 3,601,709 + -0.5 3,601,709 + -0.2 3,601,709 + -1.5 3,601,709 + +0.9 3,601,724 + -0.5 3,601,736 + -0.0 3,601,736 + -0.4 3,601,736 + -0.4 3,601,736 + -1.2 3,601,736 + +1.2 3,601,736 + +0.1 3,601,736 + -0.5 3,601,736 + -1.3 3,601,736 + -0.7 3,601,736 + -0.2 3,601,736 + -0.6 3,601,736 + -0.6 3,601,736 + -0.1 3,601,736 + -0.4 3,601,737 - +1.8 3,601,737 - +1.3 3,601,737 - +0.5 3,601,737 - -0.9 3,601,737 - +0.4 3,601,737 - +1.2 3,601,737 - +0.9 3,601,737 - +0.3 3,601,737 - +1.6 3,601,737 - +1.0 3,601,750 + -0.1 3,601,750 + -1.3 3,601,751 - +0.7 3,601,783 + -2.4 3,601,910 - +0.1 3,601,984 + +0.9 3,601,985 - -0.0 3,601,991 - +0.9 3,602,632 + Psest_3433 0.40 -0.3 3,602,632 + Psest_3433 0.40 +1.5 3,602,693 - Psest_3433 0.44 -1.2 3,602,704 + Psest_3433 0.45 +1.0 3,602,704 + Psest_3433 0.45 +0.6 3,602,704 + Psest_3433 0.45 +0.7 3,602,704 + Psest_3433 0.45 +1.7 3,602,704 + Psest_3433 0.45 +1.0 3,602,705 - Psest_3433 0.45 +0.8 3,602,705 - Psest_3433 0.45 +0.1 3,602,705 - Psest_3433 0.45 +2.2 3,602,908 + Psest_3433 0.57 +1.1 3,602,908 + Psest_3433 0.57 +0.9 3,602,908 + Psest_3433 0.57 +0.0 3,602,909 - Psest_3433 0.57 +1.2 3,602,909 - Psest_3433 0.57 +1.0 3,602,909 - Psest_3433 0.57 +1.2 3,602,909 - Psest_3433 0.57 +0.8 3,602,909 - Psest_3433 0.57 +0.8 3,603,232 + Psest_3433 0.76 +1.8 3,603,232 + Psest_3433 0.76 +1.2 3,603,233 - Psest_3433 0.76 +0.3 3,603,233 - Psest_3433 0.76 +0.9 3,603,233 - Psest_3433 0.76 +1.7 3,603,514 + +0.8 3,603,515 - +0.9 3,603,515 - +1.2 3,603,553 + +1.0 3,603,553 + +1.4 3,603,553 + +1.1 3,603,554 - +1.6 3,603,554 - +0.7 3,603,554 - +1.7 3,603,562 + +0.1 3,603,562 + +1.3 3,603,563 - +3.0 3,603,623 - +0.9 3,603,623 - +0.2 3,603,782 - +0.8 3,603,948 - +0.8 3,604,123 + Psest_3434 0.16 +0.4 3,604,123 + Psest_3434 0.16 +1.9 3,604,123 + Psest_3434 0.16 +0.4 3,604,123 + Psest_3434 0.16 +0.4 3,604,123 + Psest_3434 0.16 +0.6 3,604,124 - Psest_3434 0.16 +0.6 3,604,124 - Psest_3434 0.16 +1.9 3,604,124 - Psest_3434 0.16 +0.6 3,604,124 - Psest_3434 0.16 -0.3 3,604,153 + Psest_3434 0.18 +0.3 3,604,153 + Psest_3434 0.18 +1.9 3,604,153 + Psest_3434 0.18 +0.2 3,604,153 + Psest_3434 0.18 +1.5 3,604,153 + Psest_3434 0.18 +0.7 3,604,153 + Psest_3434 0.18 +0.5 3,604,153 + Psest_3434 0.18 +1.1 3,604,154 - Psest_3434 0.18 +0.6 3,604,154 - Psest_3434 0.18 +0.5 3,604,154 - Psest_3434 0.18 +0.8 3,604,154 - Psest_3434 0.18 +1.8 3,604,154 - Psest_3434 0.18 +0.1 3,604,154 - Psest_3434 0.18 +3.7 3,604,154 - Psest_3434 0.18 +0.8 3,604,154 - Psest_3434 0.18 +0.2 3,604,154 - Psest_3434 0.18 -0.2 3,604,154 - Psest_3434 0.18 +0.9 3,604,154 - Psest_3434 0.18 +0.9 3,604,154 - Psest_3434 0.18 +0.8 3,604,238 - Psest_3434 0.22 +0.7 3,604,310 + Psest_3434 0.26 +0.9 3,604,311 - Psest_3434 0.26 +0.0 3,604,311 - Psest_3434 0.26 +2.0 3,604,311 - Psest_3434 0.26 +1.4 3,604,311 - Psest_3434 0.26 -1.1 3,604,311 - Psest_3434 0.26 +0.5 3,604,349 + Psest_3434 0.27 +0.9 3,604,349 + Psest_3434 0.27 +0.1 3,604,349 + Psest_3434 0.27 +0.0 3,604,349 + Psest_3434 0.27 +1.2 3,604,349 + Psest_3434 0.27 +0.0 3,604,349 + Psest_3434 0.27 +1.3 3,604,349 + Psest_3434 0.27 +0.9 3,604,350 - Psest_3434 0.28 +1.5 3,604,350 - Psest_3434 0.28 +1.2 3,604,350 - Psest_3434 0.28 +0.5 3,604,350 - Psest_3434 0.28 -0.1 3,604,350 - Psest_3434 0.28 +0.1 3,604,517 + Psest_3434 0.36 +1.1
Or see this region's nucleotide sequence