Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3374 and Psest_3375 overlap by 4 nucleotides Psest_3375 and Psest_3376 are separated by 53 nucleotides Psest_3376 and Psest_3377 are separated by 119 nucleotides Psest_3377 and Psest_3378 overlap by 8 nucleotides
Psest_3374: Psest_3374 - Tfp pilus assembly protein, tip-associated adhesin PilY1, at 3,541,786 to 3,545,556
_3374
Psest_3375: Psest_3375 - prepilin-type N-terminal cleavage/methylation domain, at 3,545,553 to 3,545,999
_3375
Psest_3376: Psest_3376 - (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming), at 3,546,053 to 3,546,997
_3376
Psest_3377: Psest_3377 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 3,547,117 to 3,547,554
_3377
Psest_3378: Psest_3378 - lipoprotein signal peptidase, at 3,547,547 to 3,548,050
_3378
Position (kb)
3546
3547 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3545.275 kb on + strand at 3545.317 kb on + strand at 3545.404 kb on - strand at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.670 kb on + strand, within Psest_3375 at 3545.671 kb on - strand, within Psest_3375 at 3545.671 kb on - strand, within Psest_3375 at 3545.742 kb on + strand, within Psest_3375 at 3545.742 kb on + strand, within Psest_3375 at 3545.742 kb on + strand, within Psest_3375 at 3545.742 kb on + strand, within Psest_3375 at 3545.760 kb on + strand, within Psest_3375 at 3545.760 kb on + strand, within Psest_3375 at 3545.760 kb on + strand, within Psest_3375 at 3545.760 kb on + strand, within Psest_3375 at 3545.764 kb on + strand, within Psest_3375 at 3545.764 kb on + strand, within Psest_3375 at 3545.832 kb on + strand, within Psest_3375 at 3545.832 kb on + strand, within Psest_3375 at 3545.833 kb on - strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.870 kb on + strand, within Psest_3375 at 3545.871 kb on - strand, within Psest_3375 at 3545.871 kb on - strand, within Psest_3375 at 3545.871 kb on - strand, within Psest_3375 at 3545.874 kb on + strand, within Psest_3375 at 3545.875 kb on - strand, within Psest_3375 at 3545.875 kb on - strand, within Psest_3375 at 3545.875 kb on - strand, within Psest_3375 at 3545.875 kb on - strand, within Psest_3375 at 3545.875 kb on - strand, within Psest_3375 at 3547.038 kb on + strand at 3547.038 kb on + strand at 3547.397 kb on + strand, within Psest_3377
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,545,275 + -0.0 3,545,317 + +0.2 3,545,404 - +1.1 3,545,670 + Psest_3375 0.26 +0.7 3,545,670 + Psest_3375 0.26 +0.9 3,545,670 + Psest_3375 0.26 -0.1 3,545,670 + Psest_3375 0.26 +0.0 3,545,670 + Psest_3375 0.26 -1.5 3,545,670 + Psest_3375 0.26 +2.7 3,545,670 + Psest_3375 0.26 +1.1 3,545,670 + Psest_3375 0.26 -0.7 3,545,671 - Psest_3375 0.26 -1.1 3,545,671 - Psest_3375 0.26 +0.6 3,545,742 + Psest_3375 0.42 -1.6 3,545,742 + Psest_3375 0.42 -0.7 3,545,742 + Psest_3375 0.42 +1.0 3,545,742 + Psest_3375 0.42 -1.8 3,545,760 + Psest_3375 0.46 +0.2 3,545,760 + Psest_3375 0.46 +0.8 3,545,760 + Psest_3375 0.46 +0.6 3,545,760 + Psest_3375 0.46 +0.3 3,545,764 + Psest_3375 0.47 -0.9 3,545,764 + Psest_3375 0.47 +0.1 3,545,832 + Psest_3375 0.62 +0.3 3,545,832 + Psest_3375 0.62 -1.0 3,545,833 - Psest_3375 0.63 +0.1 3,545,870 + Psest_3375 0.71 -0.2 3,545,870 + Psest_3375 0.71 -0.6 3,545,870 + Psest_3375 0.71 +0.1 3,545,870 + Psest_3375 0.71 -0.8 3,545,870 + Psest_3375 0.71 -0.7 3,545,870 + Psest_3375 0.71 +0.5 3,545,870 + Psest_3375 0.71 +0.3 3,545,871 - Psest_3375 0.71 -2.8 3,545,871 - Psest_3375 0.71 -2.5 3,545,871 - Psest_3375 0.71 -0.2 3,545,874 + Psest_3375 0.72 -0.2 3,545,875 - Psest_3375 0.72 -1.6 3,545,875 - Psest_3375 0.72 -0.8 3,545,875 - Psest_3375 0.72 -1.6 3,545,875 - Psest_3375 0.72 -1.1 3,545,875 - Psest_3375 0.72 +1.4 3,547,038 + +0.5 3,547,038 + +1.0 3,547,397 + Psest_3377 0.64 -0.5
Or see this region's nucleotide sequence