Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1738

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_1737 and Psest_1738 are separated by 15 nucleotidesPsest_1738 and Psest_1739 are separated by 91 nucleotidesPsest_1739 and Psest_1740 are separated by 17 nucleotides Psest_1737: Psest_1737 - flagellar biosynthesis protein FlhA, at 1,840,957 to 1,843,077 _1737 Psest_1738: Psest_1738 - flagellar biosynthetic protein FlhF, at 1,843,093 to 1,844,382 _1738 Psest_1739: Psest_1739 - ATPases involved in chromosome partitioning, at 1,844,474 to 1,845,301 _1739 Psest_1740: Psest_1740 - RNA polymerase sigma factor, FliA/WhiG family, at 1,845,319 to 1,846,044 _1740 Position (kb) 1843 1844 1845Strain fitness (log2 ratio) -1 0 1 2 3at 1842.412 kb on + strand, within Psest_1737at 1842.413 kb on - strand, within Psest_1737at 1842.413 kb on - strand, within Psest_1737at 1843.794 kb on - strand, within Psest_1738at 1843.801 kb on + strand, within Psest_1738at 1843.801 kb on + strand, within Psest_1738at 1844.056 kb on + strand, within Psest_1738at 1844.056 kb on + strand, within Psest_1738at 1844.056 kb on + strand, within Psest_1738at 1844.057 kb on - strand, within Psest_1738at 1844.113 kb on + strand, within Psest_1738at 1844.139 kb on + strand, within Psest_1738at 1844.139 kb on + strand, within Psest_1738at 1844.180 kb on + strand, within Psest_1738at 1844.180 kb on + strand, within Psest_1738at 1844.218 kb on + strand, within Psest_1738at 1844.337 kb on + strandat 1844.459 kb on + strandat 1844.459 kb on + strandat 1844.459 kb on + strandat 1844.459 kb on + strandat 1844.461 kb on + strandat 1844.461 kb on + strandat 1844.461 kb on + strandat 1844.461 kb on + strandat 1844.461 kb on + strandat 1844.461 kb on + strandat 1844.461 kb on + strandat 1845.319 kb on - strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.322 kb on + strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.323 kb on - strandat 1845.326 kb on - strandat 1845.326 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,842,412 + Psest_1737 0.69 +2.6
1,842,413 - Psest_1737 0.69 +1.8
1,842,413 - Psest_1737 0.69 +2.1
1,843,794 - Psest_1738 0.54 -0.5
1,843,801 + Psest_1738 0.55 +1.1
1,843,801 + Psest_1738 0.55 +0.6
1,844,056 + Psest_1738 0.75 +0.1
1,844,056 + Psest_1738 0.75 -0.1
1,844,056 + Psest_1738 0.75 +1.0
1,844,057 - Psest_1738 0.75 -1.0
1,844,113 + Psest_1738 0.79 +1.4
1,844,139 + Psest_1738 0.81 +0.4
1,844,139 + Psest_1738 0.81 -0.5
1,844,180 + Psest_1738 0.84 +1.3
1,844,180 + Psest_1738 0.84 +0.3
1,844,218 + Psest_1738 0.87 +1.4
1,844,337 + +0.2
1,844,459 + +0.9
1,844,459 + +0.5
1,844,459 + +0.8
1,844,459 + +0.1
1,844,461 + +1.2
1,844,461 + +0.5
1,844,461 + +0.4
1,844,461 + +0.4
1,844,461 + +0.3
1,844,461 + +0.3
1,844,461 + -1.0
1,845,319 - +1.4
1,845,322 + +1.7
1,845,322 + +1.5
1,845,322 + +0.9
1,845,322 + +1.2
1,845,322 + +1.9
1,845,322 + -0.3
1,845,322 + +2.9
1,845,322 + +0.7
1,845,322 + +0.8
1,845,322 + +1.9
1,845,322 + +2.1
1,845,322 + +1.3
1,845,322 + +1.8
1,845,322 + +1.8
1,845,323 - +1.8
1,845,323 - +1.9
1,845,323 - +1.2
1,845,323 - +1.0
1,845,323 - +0.2
1,845,323 - +0.8
1,845,323 - +0.9
1,845,323 - +0.8
1,845,323 - +1.8
1,845,323 - +1.5
1,845,323 - +1.0
1,845,323 - +1.0
1,845,326 - +1.5
1,845,326 - -0.2

Or see this region's nucleotide sequence