Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1732 and Psest_1733 are separated by 12 nucleotides Psest_1733 and Psest_1734 are separated by 6 nucleotides Psest_1734 and Psest_1735 are separated by 33 nucleotides
Psest_1732: Psest_1732 - flagellar biosynthetic protein FliP, at 1,837,157 to 1,837,933
_1732
Psest_1733: Psest_1733 - flagellar biosynthetic protein FliQ, at 1,837,946 to 1,838,215
_1733
Psest_1734: Psest_1734 - flagellar biosynthetic protein FliR, at 1,838,222 to 1,838,998
_1734
Psest_1735: Psest_1735 - flagellar biosynthetic protein FlhB, at 1,839,032 to 1,840,168
_1735
Position (kb)
1838
1839 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1837.269 kb on + strand, within Psest_1732 at 1837.276 kb on - strand, within Psest_1732 at 1837.280 kb on - strand, within Psest_1732 at 1837.280 kb on - strand, within Psest_1732 at 1837.539 kb on - strand, within Psest_1732 at 1837.539 kb on - strand, within Psest_1732 at 1837.661 kb on - strand, within Psest_1732 at 1837.661 kb on - strand, within Psest_1732 at 1837.661 kb on - strand, within Psest_1732 at 1837.931 kb on + strand at 1838.164 kb on + strand, within Psest_1733 at 1838.171 kb on + strand, within Psest_1733 at 1838.171 kb on + strand, within Psest_1733 at 1838.172 kb on - strand, within Psest_1733 at 1838.227 kb on - strand at 1838.354 kb on + strand, within Psest_1734 at 1838.355 kb on - strand, within Psest_1734 at 1838.614 kb on + strand, within Psest_1734 at 1838.614 kb on + strand, within Psest_1734 at 1838.614 kb on + strand, within Psest_1734 at 1838.615 kb on - strand, within Psest_1734 at 1838.615 kb on - strand, within Psest_1734 at 1838.615 kb on - strand, within Psest_1734 at 1838.615 kb on - strand, within Psest_1734 at 1838.615 kb on - strand, within Psest_1734 at 1838.658 kb on + strand, within Psest_1734 at 1838.659 kb on - strand, within Psest_1734 at 1838.858 kb on - strand, within Psest_1734 at 1839.725 kb on + strand, within Psest_1735 at 1839.725 kb on + strand, within Psest_1735 at 1839.725 kb on + strand, within Psest_1735 at 1839.726 kb on - strand, within Psest_1735 at 1839.726 kb on - strand, within Psest_1735 at 1839.726 kb on - strand, within Psest_1735 at 1839.726 kb on - strand, within Psest_1735 at 1839.869 kb on + strand, within Psest_1735
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,837,269 + Psest_1732 0.14 +1.1 1,837,276 - Psest_1732 0.15 +1.6 1,837,280 - Psest_1732 0.16 +2.5 1,837,280 - Psest_1732 0.16 +2.0 1,837,539 - Psest_1732 0.49 +2.6 1,837,539 - Psest_1732 0.49 +0.8 1,837,661 - Psest_1732 0.65 +2.5 1,837,661 - Psest_1732 0.65 +2.4 1,837,661 - Psest_1732 0.65 +1.7 1,837,931 + -0.5 1,838,164 + Psest_1733 0.81 +1.8 1,838,171 + Psest_1733 0.83 +2.1 1,838,171 + Psest_1733 0.83 +2.7 1,838,172 - Psest_1733 0.84 +1.2 1,838,227 - -0.1 1,838,354 + Psest_1734 0.17 +1.4 1,838,355 - Psest_1734 0.17 +1.6 1,838,614 + Psest_1734 0.50 +3.0 1,838,614 + Psest_1734 0.50 +2.4 1,838,614 + Psest_1734 0.50 +2.0 1,838,615 - Psest_1734 0.51 +1.7 1,838,615 - Psest_1734 0.51 +1.6 1,838,615 - Psest_1734 0.51 +1.2 1,838,615 - Psest_1734 0.51 +1.7 1,838,615 - Psest_1734 0.51 +1.6 1,838,658 + Psest_1734 0.56 +1.7 1,838,659 - Psest_1734 0.56 +1.6 1,838,858 - Psest_1734 0.82 +1.3 1,839,725 + Psest_1735 0.61 +1.9 1,839,725 + Psest_1735 0.61 +2.2 1,839,725 + Psest_1735 0.61 +1.6 1,839,726 - Psest_1735 0.61 +1.7 1,839,726 - Psest_1735 0.61 +1.8 1,839,726 - Psest_1735 0.61 +2.5 1,839,726 - Psest_1735 0.61 +2.5 1,839,869 + Psest_1735 0.74 +1.5
Or see this region's nucleotide sequence