Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1572 and Psest_1573 overlap by 4 nucleotides Psest_1573 and Psest_1574 are separated by 132 nucleotides Psest_1574 and Psest_1575 are separated by 100 nucleotides
Psest_1572: Psest_1572 - Putative effector of murein hydrolase LrgA, at 1,675,208 to 1,675,573
_1572
Psest_1573: Psest_1573 - Putative effector of murein hydrolase, at 1,675,570 to 1,676,280
_1573
Psest_1574: Psest_1574 - phenazine biosynthesis protein PhzF family, at 1,676,413 to 1,677,204
_1574
Psest_1575: Psest_1575 - Beta-glucosidase-related glycosidases, at 1,677,305 to 1,679,596
_1575
Position (kb)
1676
1677
1678 Strain fitness (log2 ratio)
-1
0
1 at 1675.759 kb on + strand, within Psest_1573 at 1675.760 kb on - strand, within Psest_1573 at 1676.146 kb on + strand, within Psest_1573 at 1676.318 kb on + strand at 1676.945 kb on + strand, within Psest_1574 at 1676.946 kb on - strand, within Psest_1574 at 1676.946 kb on - strand, within Psest_1574 at 1676.946 kb on - strand, within Psest_1574 at 1676.989 kb on + strand, within Psest_1574 at 1676.990 kb on - strand, within Psest_1574 at 1676.990 kb on - strand, within Psest_1574 at 1677.203 kb on - strand at 1677.210 kb on + strand at 1677.210 kb on + strand at 1677.210 kb on + strand at 1677.210 kb on + strand at 1677.283 kb on + strand at 1677.283 kb on + strand at 1677.283 kb on + strand at 1677.284 kb on - strand at 1677.424 kb on + strand at 1677.424 kb on + strand at 1677.425 kb on - strand at 1677.520 kb on + strand at 1677.617 kb on + strand, within Psest_1575 at 1677.617 kb on + strand, within Psest_1575 at 1677.618 kb on - strand, within Psest_1575 at 1677.953 kb on + strand, within Psest_1575 at 1677.995 kb on + strand, within Psest_1575 at 1677.995 kb on + strand, within Psest_1575 at 1677.996 kb on - strand, within Psest_1575
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,675,759 + Psest_1573 0.27 -0.2 1,675,760 - Psest_1573 0.27 +1.0 1,676,146 + Psest_1573 0.81 -0.5 1,676,318 + -1.0 1,676,945 + Psest_1574 0.67 +1.6 1,676,946 - Psest_1574 0.67 -0.4 1,676,946 - Psest_1574 0.67 -0.5 1,676,946 - Psest_1574 0.67 -0.6 1,676,989 + Psest_1574 0.73 +1.7 1,676,990 - Psest_1574 0.73 +1.6 1,676,990 - Psest_1574 0.73 -1.6 1,677,203 - +1.1 1,677,210 + -0.1 1,677,210 + -0.4 1,677,210 + -0.6 1,677,210 + -1.1 1,677,283 + -0.2 1,677,283 + +0.9 1,677,283 + -0.5 1,677,284 - -0.6 1,677,424 + -0.4 1,677,424 + +0.0 1,677,425 - -0.9 1,677,520 + -0.1 1,677,617 + Psest_1575 0.14 -0.3 1,677,617 + Psest_1575 0.14 -0.5 1,677,618 - Psest_1575 0.14 -0.0 1,677,953 + Psest_1575 0.28 -1.0 1,677,995 + Psest_1575 0.30 -1.1 1,677,995 + Psest_1575 0.30 +1.1 1,677,996 - Psest_1575 0.30 -0.2
Or see this region's nucleotide sequence