Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1314 and Psest_1315 overlap by 14 nucleotides Psest_1315 and Psest_1316 overlap by 4 nucleotides Psest_1316 and Psest_1317 are separated by 84 nucleotides Psest_1317 and Psest_1318 overlap by 4 nucleotides
Psest_1314: Psest_1314 - Putative Zn-dependent protease, at 1,414,756 to 1,416,339
_1314
Psest_1315: Psest_1315 - hypothetical protein, at 1,416,326 to 1,416,628
_1315
Psest_1316: Psest_1316 - Predicted transmembrane sensor domain, at 1,416,625 to 1,417,983
_1316
Psest_1317: Psest_1317 - phosphonate ABC transporter, permease protein PhnE, at 1,418,068 to 1,418,835
_1317
Psest_1318: Psest_1318 - ABC-type phosphate/phosphonate transport system, permease component, at 1,418,832 to 1,419,665
_1318
Position (kb)
1416
1417
1418 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1415.658 kb on - strand, within Psest_1314 at 1415.658 kb on - strand, within Psest_1314 at 1415.658 kb on - strand, within Psest_1314 at 1415.658 kb on - strand, within Psest_1314 at 1415.896 kb on + strand, within Psest_1314 at 1415.896 kb on + strand, within Psest_1314 at 1415.925 kb on - strand, within Psest_1314 at 1415.937 kb on - strand, within Psest_1314 at 1415.963 kb on + strand, within Psest_1314 at 1416.044 kb on + strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.045 kb on - strand, within Psest_1314 at 1416.061 kb on + strand, within Psest_1314 at 1416.062 kb on - strand, within Psest_1314 at 1416.116 kb on + strand, within Psest_1314 at 1416.116 kb on + strand, within Psest_1314 at 1416.116 kb on + strand, within Psest_1314 at 1416.116 kb on + strand, within Psest_1314 at 1416.161 kb on + strand, within Psest_1314 at 1416.162 kb on - strand, within Psest_1314 at 1416.162 kb on - strand, within Psest_1314 at 1416.189 kb on - strand at 1416.189 kb on - strand at 1416.189 kb on - strand at 1416.289 kb on + strand at 1416.322 kb on + strand at 1416.322 kb on + strand at 1416.322 kb on + strand at 1416.323 kb on - strand at 1416.323 kb on - strand at 1416.323 kb on - strand at 1416.379 kb on + strand, within Psest_1315 at 1416.612 kb on + strand at 1416.613 kb on - strand at 1416.613 kb on - strand at 1416.620 kb on + strand at 1416.639 kb on + strand at 1416.646 kb on + strand at 1416.989 kb on + strand, within Psest_1316 at 1416.989 kb on + strand, within Psest_1316 at 1416.989 kb on + strand, within Psest_1316 at 1416.989 kb on + strand, within Psest_1316 at 1416.989 kb on + strand, within Psest_1316 at 1416.990 kb on - strand, within Psest_1316 at 1416.990 kb on - strand, within Psest_1316 at 1416.990 kb on - strand, within Psest_1316 at 1416.990 kb on - strand, within Psest_1316 at 1416.990 kb on - strand, within Psest_1316 at 1417.002 kb on - strand, within Psest_1316 at 1417.037 kb on + strand, within Psest_1316 at 1417.038 kb on - strand, within Psest_1316 at 1417.038 kb on - strand, within Psest_1316 at 1417.138 kb on + strand, within Psest_1316 at 1417.219 kb on - strand, within Psest_1316 at 1417.424 kb on + strand, within Psest_1316 at 1417.424 kb on + strand, within Psest_1316 at 1417.424 kb on + strand, within Psest_1316 at 1417.425 kb on - strand, within Psest_1316 at 1417.433 kb on + strand, within Psest_1316 at 1417.433 kb on + strand, within Psest_1316 at 1417.433 kb on + strand, within Psest_1316 at 1417.433 kb on + strand, within Psest_1316 at 1417.434 kb on - strand, within Psest_1316 at 1417.434 kb on - strand, within Psest_1316 at 1417.434 kb on - strand, within Psest_1316 at 1417.434 kb on - strand, within Psest_1316 at 1417.434 kb on - strand, within Psest_1316 at 1417.434 kb on - strand, within Psest_1316 at 1417.436 kb on - strand, within Psest_1316 at 1417.436 kb on - strand, within Psest_1316 at 1417.466 kb on + strand, within Psest_1316 at 1417.466 kb on + strand, within Psest_1316 at 1417.589 kb on + strand, within Psest_1316 at 1417.590 kb on - strand, within Psest_1316 at 1417.590 kb on - strand, within Psest_1316 at 1417.590 kb on - strand, within Psest_1316 at 1417.644 kb on + strand, within Psest_1316 at 1417.676 kb on + strand, within Psest_1316 at 1417.682 kb on + strand, within Psest_1316 at 1417.682 kb on + strand, within Psest_1316 at 1417.682 kb on + strand, within Psest_1316 at 1417.682 kb on + strand, within Psest_1316 at 1417.682 kb on + strand, within Psest_1316 at 1417.682 kb on + strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.683 kb on - strand, within Psest_1316 at 1417.716 kb on - strand, within Psest_1316 at 1417.723 kb on + strand, within Psest_1316 at 1417.723 kb on + strand, within Psest_1316 at 1417.724 kb on - strand, within Psest_1316 at 1417.724 kb on - strand, within Psest_1316 at 1417.724 kb on - strand, within Psest_1316 at 1417.754 kb on + strand, within Psest_1316 at 1417.754 kb on + strand, within Psest_1316 at 1417.844 kb on + strand, within Psest_1316 at 1417.956 kb on + strand at 1417.957 kb on - strand at 1418.189 kb on + strand, within Psest_1317 at 1418.189 kb on + strand, within Psest_1317 at 1418.189 kb on + strand at 1418.189 kb on + strand, within Psest_1317 at 1418.190 kb on - strand, within Psest_1317 at 1418.190 kb on - strand, within Psest_1317 at 1418.190 kb on - strand, within Psest_1317 at 1418.190 kb on - strand, within Psest_1317 at 1418.190 kb on - strand, within Psest_1317 at 1418.190 kb on - strand, within Psest_1317 at 1418.265 kb on - strand, within Psest_1317 at 1418.265 kb on - strand, within Psest_1317 at 1418.274 kb on - strand, within Psest_1317
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,415,658 - Psest_1314 0.57 +0.2 1,415,658 - Psest_1314 0.57 +0.8 1,415,658 - Psest_1314 0.57 +0.3 1,415,658 - Psest_1314 0.57 +0.8 1,415,896 + Psest_1314 0.72 +0.6 1,415,896 + Psest_1314 0.72 +1.0 1,415,925 - Psest_1314 0.74 +0.8 1,415,937 - Psest_1314 0.75 +0.4 1,415,963 + Psest_1314 0.76 +0.5 1,416,044 + Psest_1314 0.81 +1.2 1,416,045 - Psest_1314 0.81 +0.6 1,416,045 - Psest_1314 0.81 +0.5 1,416,045 - Psest_1314 0.81 +0.9 1,416,045 - Psest_1314 0.81 +0.7 1,416,045 - Psest_1314 0.81 +0.2 1,416,045 - Psest_1314 0.81 +0.9 1,416,045 - Psest_1314 0.81 +0.7 1,416,061 + Psest_1314 0.82 +2.0 1,416,062 - Psest_1314 0.82 -0.1 1,416,116 + Psest_1314 0.86 -1.6 1,416,116 + Psest_1314 0.86 +1.0 1,416,116 + Psest_1314 0.86 +2.6 1,416,116 + Psest_1314 0.86 +0.7 1,416,161 + Psest_1314 0.89 +1.5 1,416,162 - Psest_1314 0.89 +1.7 1,416,162 - Psest_1314 0.89 -0.5 1,416,189 - +0.6 1,416,189 - +1.0 1,416,189 - +0.5 1,416,289 + +0.0 1,416,322 + +0.6 1,416,322 + +1.1 1,416,322 + +1.5 1,416,323 - +1.0 1,416,323 - +1.3 1,416,323 - +1.2 1,416,379 + Psest_1315 0.17 +0.8 1,416,612 + +0.5 1,416,613 - +1.3 1,416,613 - +0.1 1,416,620 + -0.5 1,416,639 + +0.1 1,416,646 + +0.5 1,416,989 + Psest_1316 0.27 +0.4 1,416,989 + Psest_1316 0.27 -0.7 1,416,989 + Psest_1316 0.27 +0.3 1,416,989 + Psest_1316 0.27 +1.2 1,416,989 + Psest_1316 0.27 +0.1 1,416,990 - Psest_1316 0.27 +0.5 1,416,990 - Psest_1316 0.27 +0.2 1,416,990 - Psest_1316 0.27 +0.8 1,416,990 - Psest_1316 0.27 -0.4 1,416,990 - Psest_1316 0.27 +0.3 1,417,002 - Psest_1316 0.28 -0.6 1,417,037 + Psest_1316 0.30 -0.4 1,417,038 - Psest_1316 0.30 +0.3 1,417,038 - Psest_1316 0.30 +0.5 1,417,138 + Psest_1316 0.38 +0.6 1,417,219 - Psest_1316 0.44 +1.3 1,417,424 + Psest_1316 0.59 +1.1 1,417,424 + Psest_1316 0.59 +3.1 1,417,424 + Psest_1316 0.59 +0.8 1,417,425 - Psest_1316 0.59 +0.7 1,417,433 + Psest_1316 0.59 -1.1 1,417,433 + Psest_1316 0.59 +0.9 1,417,433 + Psest_1316 0.59 +0.4 1,417,433 + Psest_1316 0.59 +0.6 1,417,434 - Psest_1316 0.60 +0.4 1,417,434 - Psest_1316 0.60 +1.3 1,417,434 - Psest_1316 0.60 +0.5 1,417,434 - Psest_1316 0.60 +0.4 1,417,434 - Psest_1316 0.60 +1.6 1,417,434 - Psest_1316 0.60 +0.8 1,417,436 - Psest_1316 0.60 +1.0 1,417,436 - Psest_1316 0.60 +0.8 1,417,466 + Psest_1316 0.62 +1.4 1,417,466 + Psest_1316 0.62 +1.7 1,417,589 + Psest_1316 0.71 -0.2 1,417,590 - Psest_1316 0.71 +0.1 1,417,590 - Psest_1316 0.71 +0.7 1,417,590 - Psest_1316 0.71 +1.6 1,417,644 + Psest_1316 0.75 +0.3 1,417,676 + Psest_1316 0.77 +0.2 1,417,682 + Psest_1316 0.78 +0.8 1,417,682 + Psest_1316 0.78 -0.3 1,417,682 + Psest_1316 0.78 +1.6 1,417,682 + Psest_1316 0.78 +0.5 1,417,682 + Psest_1316 0.78 +0.7 1,417,682 + Psest_1316 0.78 +0.1 1,417,683 - Psest_1316 0.78 +0.7 1,417,683 - Psest_1316 0.78 -0.2 1,417,683 - Psest_1316 0.78 +0.6 1,417,683 - Psest_1316 0.78 +1.1 1,417,683 - Psest_1316 0.78 +0.7 1,417,683 - Psest_1316 0.78 +0.8 1,417,683 - Psest_1316 0.78 -1.0 1,417,683 - Psest_1316 0.78 -0.5 1,417,716 - Psest_1316 0.80 +1.4 1,417,723 + Psest_1316 0.81 +0.2 1,417,723 + Psest_1316 0.81 -1.9 1,417,724 - Psest_1316 0.81 -0.0 1,417,724 - Psest_1316 0.81 +0.5 1,417,724 - Psest_1316 0.81 +0.7 1,417,754 + Psest_1316 0.83 +0.6 1,417,754 + Psest_1316 0.83 +1.5 1,417,844 + Psest_1316 0.90 +0.7 1,417,956 + +0.1 1,417,957 - +0.9 1,418,189 + Psest_1317 0.16 +0.3 1,418,189 + Psest_1317 0.16 -0.2 1,418,189 + -1.0 1,418,189 + Psest_1317 0.16 +0.7 1,418,190 - Psest_1317 0.16 -0.0 1,418,190 - Psest_1317 0.16 +1.7 1,418,190 - Psest_1317 0.16 +0.1 1,418,190 - Psest_1317 0.16 -2.0 1,418,190 - Psest_1317 0.16 -1.6 1,418,190 - Psest_1317 0.16 +0.5 1,418,265 - Psest_1317 0.26 +0.1 1,418,265 - Psest_1317 0.26 +0.2 1,418,274 - Psest_1317 0.27 +0.0
Or see this region's nucleotide sequence