Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2586

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
2,765,043	+				-2.3
2,765,044	-				-1.2
2,765,071	+				-4.7
2,765,071	+				-2.8
2,765,075	+				-1.8
2,765,075	+				-4.3
2,765,075	+				-2.1
2,765,075	+				-4.7
2,765,076	-				-2.5
2,765,080	-				-0.9
2,765,476	-		Psest_2585	0.37	-0.5
2,765,754	+		Psest_2585	0.69	-0.2
2,765,942	+				+0.9
2,766,041	+				-2.8
2,766,042	-				-1.3
2,766,042	-				-0.6
2,766,042	-				-1.4
2,766,042	-				-1.1
2,766,042	-				-1.9
2,766,134	-				-2.6
2,766,134	-				-2.5
2,766,134	-				-1.6
2,766,134	-				-1.6
2,766,134	-				-2.7
2,766,134	-				-2.0
2,766,134	-				-2.5
2,766,134	-				-0.5
2,766,134	-				-1.5
2,766,134	-				-0.9
2,766,174	-				-3.1
2,766,387	-		Psest_2586	0.13	-1.3
2,766,426	-		Psest_2586	0.15	-1.3
2,766,439	-		Psest_2586	0.15	-3.2
2,766,603	+		Psest_2586	0.21	-2.2
2,766,603	+		Psest_2586	0.21	-3.0
2,766,604	-		Psest_2586	0.21	-3.4
2,766,604	-		Psest_2586	0.21	-4.6
2,766,604	-		Psest_2586	0.21	-1.0
2,766,604	-		Psest_2586	0.21	-2.3
2,766,604	-		Psest_2586	0.21	-2.1
2,766,869	-		Psest_2586	0.31	-3.6
2,766,869	-		Psest_2586	0.31	-3.2
2,766,873	-		Psest_2586	0.31	-0.9
2,766,873	-		Psest_2586	0.31	-3.5
2,766,873	-		Psest_2586	0.31	-4.1
2,766,873	-		Psest_2586	0.31	-1.7
2,766,873	-		Psest_2586	0.31	+0.2
2,766,873	-		Psest_2586	0.31	-2.3
2,766,873	-		Psest_2586	0.31	-2.3
2,766,873	-		Psest_2586	0.31	-3.7
2,766,873	-		Psest_2586	0.31	-3.1
2,766,873	-		Psest_2586	0.31	-2.0
2,766,873	-		Psest_2586	0.31	-2.7
2,766,873	-		Psest_2586	0.31	-2.6
2,766,873	-		Psest_2586	0.31	-1.3
2,766,873	-		Psest_2586	0.31	-1.7
2,766,873	-		Psest_2586	0.31	-2.5
2,766,873	-		Psest_2586	0.31	-3.2
2,766,873	-		Psest_2586	0.31	-3.1
2,766,873	-		Psest_2586	0.31	-3.4
2,766,873	-		Psest_2586	0.31	-2.7
2,766,873	-		Psest_2586	0.31	-1.5
2,766,991	-		Psest_2586	0.35	-0.4
2,766,991	-		Psest_2586	0.35	-0.8
2,766,991	-		Psest_2586	0.35	-2.7
2,766,991	-		Psest_2586	0.35	-2.2
2,767,069	+		Psest_2586	0.38	-2.1
2,767,069	+		Psest_2586	0.38	-2.5
2,767,070	-		Psest_2586	0.38	-3.2
2,767,070	-		Psest_2586	0.38	-2.8
2,767,070	-		Psest_2586	0.38	-2.2
2,767,070	-		Psest_2586	0.38	-2.2
2,767,070	-		Psest_2586	0.38	-3.1
2,767,070	-		Psest_2586	0.38	-2.1
2,767,070	-		Psest_2586	0.38	-3.2
2,767,070	-		Psest_2586	0.38	-0.5
2,767,070	-		Psest_2586	0.38	-3.2
2,767,070	-		Psest_2586	0.38	-0.7
2,767,070	-		Psest_2586	0.38	-1.1
2,767,070	-		Psest_2586	0.38	-3.2
2,767,070	-		Psest_2586	0.38	-1.4
2,767,070	-		Psest_2586	0.38	-4.4
2,767,070	-		Psest_2586	0.38	-3.3
2,767,070	-		Psest_2586	0.38	-3.1
2,767,070	-		Psest_2586	0.38	-2.4
2,767,070	-		Psest_2586	0.38	-3.3
2,767,070	-		Psest_2586	0.38	-4.0
2,767,070	-		Psest_2586	0.38	-3.5
2,767,074	-		Psest_2586	0.39	-2.4
2,767,074	-		Psest_2586	0.39	-3.7
2,767,074	-		Psest_2586	0.39	-3.2
2,767,074	-		Psest_2586	0.39	-2.9
2,767,074	-		Psest_2586	0.39	-3.2
2,767,074	-		Psest_2586	0.39	-2.4
2,767,074	-		Psest_2586	0.39	-2.3
2,767,074	-		Psest_2586	0.39	-3.4
2,767,074	-		Psest_2586	0.39	-1.7
2,767,074	-		Psest_2586	0.39	-0.4
2,767,291	-		Psest_2586	0.46	-2.4
2,767,393	-		Psest_2586	0.50	-3.1
2,767,536	-		Psest_2586	0.55	-3.0
2,767,536	-		Psest_2586	0.55	-2.3
2,767,768	-		Psest_2586	0.64	-1.8
2,767,830	-		Psest_2586	0.66	-3.1
2,767,830	-		Psest_2586	0.66	-2.3
2,767,830	-		Psest_2586	0.66	-1.8
2,767,836	-		Psest_2586	0.66	-2.5
2,768,023	-		Psest_2586	0.73	-1.1
2,768,023	-		Psest_2586	0.73	-2.3
2,768,074	-		Psest_2586	0.75	-0.4
2,768,074	-		Psest_2586	0.75	-2.6
2,768,074	-		Psest_2586	0.75	-2.6
2,768,074	-		Psest_2586	0.75	-1.4
2,768,074	-		Psest_2586	0.75	-2.7
2,768,074	-		Psest_2586	0.75	-1.5
2,768,074	-		Psest_2586	0.75	-2.9
2,768,074	-		Psest_2586	0.75	-2.9
2,768,074	-		Psest_2586	0.75	-1.7
2,768,074	-		Psest_2586	0.75	-1.3
2,768,074	-		Psest_2586	0.75	-1.8
2,768,163	+		Psest_2586	0.78	-2.6
2,768,163	+		Psest_2586	0.78	-2.5
2,768,163	+		Psest_2586	0.78	-1.3
2,768,164	-		Psest_2586	0.78	-4.1
2,768,164	-		Psest_2586	0.78	-2.4
2,768,164	-		Psest_2586	0.78	-2.4
2,768,164	-		Psest_2586	0.78	-3.1
2,768,164	-		Psest_2586	0.78	-0.7
2,768,164	-		Psest_2586	0.78	-3.0
2,768,164	-		Psest_2586	0.78	-2.0
2,768,164	-		Psest_2586	0.78	-2.9
2,768,164	-		Psest_2586	0.78	-2.5
2,768,164	-		Psest_2586	0.78	-2.0
2,768,164	-		Psest_2586	0.78	-2.5
2,768,164	-		Psest_2586	0.78	-3.0
2,768,164	-		Psest_2586	0.78	-4.2
2,768,164	-		Psest_2586	0.78	-1.3
2,768,164	-		Psest_2586	0.78	-3.7
2,768,164	-		Psest_2586	0.78	-3.4
2,768,198	-		Psest_2586	0.80	-3.7
2,768,198	-		Psest_2586	0.80	-2.6
2,768,313	-		Psest_2586	0.84	-1.0
2,768,353	+		Psest_2586	0.85	-4.4
2,768,379	-		Psest_2586	0.86	-5.0
2,768,379	-		Psest_2586	0.86	-1.9
2,768,381	-		Psest_2586	0.86	-2.0
2,768,412	+		Psest_2586	0.87	-2.3
2,768,413	-		Psest_2586	0.88	-2.0
2,768,413	-		Psest_2586	0.88	-1.5
2,768,472	+		Psest_2586	0.90	-2.3
2,768,497	-				-1.6
2,768,528	-				-1.6
2,768,755	-				-2.2
2,768,759	-				-0.1
2,768,802	-				-0.0
2,768,802	-				-0.6
2,768,873	-				-0.4
2,768,891	-				+0.5
2,768,902	-				-0.1
2,768,907	+				-2.0
2,769,033	+		Psest_2587	0.13	-2.9
2,769,033	+		Psest_2587	0.13	-3.1
2,769,033	+		Psest_2587	0.13	-2.2
2,769,033	+		Psest_2587	0.13	-1.3
2,769,034	-		Psest_2587	0.13	-1.5
2,769,170	+		Psest_2587	0.27	-1.5
2,769,170	+		Psest_2587	0.27	+0.5
2,769,170	+		Psest_2587	0.27	-2.8
2,769,171	-		Psest_2587	0.27	+0.5
2,769,171	-		Psest_2587	0.27	-0.1
2,769,171	-		Psest_2587	0.27	+0.9
2,769,171	-		Psest_2587	0.27	-1.8
2,769,171	-		Psest_2587	0.27	-0.1
2,769,171	-		Psest_2587	0.27	-1.3
2,769,171	-		Psest_2587	0.27	+0.1
2,769,171	-		Psest_2587	0.27	+0.9
2,769,378	-		Psest_2587	0.47	+0.5
2,769,378	-		Psest_2587	0.47	+1.1
2,769,378	-		Psest_2587	0.47	+0.4
2,769,449	-		Psest_2587	0.54	-0.7
2,769,462	-		Psest_2587	0.56	-1.0
2,769,462	-		Psest_2587	0.56	-0.2
2,769,743	+		Psest_2587	0.83	-1.0