Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0454 and Psest_0455 are separated by 8 nucleotides Psest_0455 and Psest_0456 overlap by 1 nucleotides Psest_0456 and Psest_0457 overlap by 4 nucleotides Psest_0457 and Psest_0458 overlap by 4 nucleotides
Psest_0454: Psest_0454 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 500,375 to 501,181
_0454
Psest_0455: Psest_0455 - ADP-heptose:LPS heptosyltransferase, at 501,190 to 502,146
_0455
Psest_0456: Psest_0456 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 502,146 to 502,880
_0456
Psest_0457: Psest_0457 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 502,877 to 503,623
_0457
Psest_0458: Psest_0458 - Mn2+-dependent serine/threonine protein kinase, at 503,620 to 505,065
_0458
Position (kb) 502
503 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8
9 at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.272 kb on + strand at 501.272 kb on + strand at 501.309 kb on + strand, within Psest_0455 at 501.309 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.334 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.415 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.513 kb on + strand, within Psest_0455 at 501.617 kb on + strand, within Psest_0455 at 501.617 kb on + strand, within Psest_0455 at 501.617 kb on + strand, within Psest_0455 at 501.677 kb on + strand, within Psest_0455 at 501.710 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.748 kb on + strand, within Psest_0455 at 501.996 kb on + strand, within Psest_0455 at 502.084 kb on + strand at 502.084 kb on + strand at 502.084 kb on + strand at 502.084 kb on + strand at 502.084 kb on + strand at 502.088 kb on + strand at 502.137 kb on + strand at 502.173 kb on + strand at 502.376 kb on + strand, within Psest_0456 at 502.860 kb on + strand at 502.962 kb on + strand, within Psest_0457 at 503.042 kb on + strand, within Psest_0457 at 503.247 kb on + strand, within Psest_0457 at 503.247 kb on + strand, within Psest_0457 at 503.247 kb on + strand, within Psest_0457 at 503.247 kb on + strand, within Psest_0457 at 503.418 kb on + strand, within Psest_0457 at 503.451 kb on + strand, within Psest_0457
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 501,236 + -2.2 501,236 + +3.4 501,236 + +0.7 501,236 + +2.9 501,251 + +6.6 501,251 + +6.6 501,251 + +4.8 501,251 + +7.0 501,251 + +5.9 501,251 + +4.4 501,251 + +3.5 501,253 + +3.8 501,253 + +4.1 501,253 + +5.6 501,253 + -0.6 501,253 + +4.1 501,253 + +4.6 501,253 + -0.3 501,253 + +3.4 501,253 + +9.3 501,253 + +9.4 501,253 + +4.4 501,253 + +1.0 501,253 + +4.3 501,272 + +8.1 501,272 + +7.7 501,309 + Psest_0455 0.12 +8.1 501,309 + Psest_0455 0.12 +3.2 501,318 + Psest_0455 0.13 +4.0 501,318 + Psest_0455 0.13 +4.4 501,334 + Psest_0455 0.15 +3.2 501,334 + Psest_0455 0.15 +4.3 501,334 + Psest_0455 0.15 +4.7 501,334 + Psest_0455 0.15 +4.2 501,415 + Psest_0455 0.24 +3.8 501,415 + Psest_0455 0.24 +4.6 501,415 + Psest_0455 0.24 +3.4 501,415 + Psest_0455 0.24 +3.2 501,415 + Psest_0455 0.24 +5.1 501,513 + Psest_0455 0.34 +4.4 501,513 + Psest_0455 0.34 +6.7 501,513 + Psest_0455 0.34 +2.7 501,513 + Psest_0455 0.34 +1.7 501,617 + Psest_0455 0.45 +5.0 501,617 + Psest_0455 0.45 +6.8 501,617 + Psest_0455 0.45 +2.0 501,677 + Psest_0455 0.51 +6.4 501,710 + Psest_0455 0.54 +4.9 501,748 + Psest_0455 0.58 +2.8 501,748 + Psest_0455 0.58 +2.9 501,748 + Psest_0455 0.58 +1.8 501,748 + Psest_0455 0.58 +2.4 501,996 + Psest_0455 0.84 +3.3 502,084 + +2.9 502,084 + +1.3 502,084 + +1.7 502,084 + +4.8 502,084 + +0.7 502,088 + +4.5 502,137 + +3.0 502,173 + +6.2 502,376 + Psest_0456 0.31 +7.5 502,860 + +7.5 502,962 + Psest_0457 0.11 +4.4 503,042 + Psest_0457 0.22 +8.9 503,247 + Psest_0457 0.50 +9.3 503,247 + Psest_0457 0.50 +2.2 503,247 + Psest_0457 0.50 +8.1 503,247 + Psest_0457 0.50 +3.7 503,418 + Psest_0457 0.72 +4.8 503,451 + Psest_0457 0.77 +3.0
Or see this region's nucleotide sequence