Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0367 and Psest_0368 are separated by 399 nucleotides Psest_0368 and Psest_0369 are separated by 102 nucleotides
Psest_0367: Psest_0367 - Predicted branched-chain amino acid permease (azaleucine resistance), at 392,835 to 393,551
_0367
Psest_0368: Psest_0368 - Transcriptional regulator, at 393,951 to 394,865
_0368
Psest_0369: Psest_0369 - L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily, at 394,968 to 396,110
_0369
Position (kb) 393
394
395 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 393.256 kb on + strand, within Psest_0367 at 393.256 kb on + strand, within Psest_0367 at 393.620 kb on + strand at 393.620 kb on + strand at 393.620 kb on + strand at 393.621 kb on - strand at 393.621 kb on - strand at 393.718 kb on + strand at 393.718 kb on + strand at 393.718 kb on + strand at 393.718 kb on + strand at 393.718 kb on + strand at 393.737 kb on - strand at 393.737 kb on - strand at 393.740 kb on + strand at 393.740 kb on + strand at 393.740 kb on + strand at 393.740 kb on + strand at 393.741 kb on - strand at 393.741 kb on - strand at 393.741 kb on - strand at 393.741 kb on - strand at 393.749 kb on + strand at 393.750 kb on - strand at 393.750 kb on - strand at 393.750 kb on - strand at 393.750 kb on - strand at 393.952 kb on + strand at 394.102 kb on - strand, within Psest_0368 at 394.283 kb on - strand, within Psest_0368 at 394.749 kb on + strand, within Psest_0368 at 394.836 kb on - strand at 394.980 kb on + strand at 394.980 kb on + strand at 394.980 kb on + strand at 394.980 kb on + strand at 395.059 kb on + strand at 395.059 kb on + strand at 395.060 kb on - strand at 395.132 kb on + strand, within Psest_0369 at 395.133 kb on - strand, within Psest_0369 at 395.151 kb on + strand, within Psest_0369 at 395.151 kb on + strand, within Psest_0369 at 395.181 kb on + strand, within Psest_0369 at 395.182 kb on - strand, within Psest_0369 at 395.182 kb on - strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.406 kb on + strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369 at 395.407 kb on - strand, within Psest_0369
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 393,256 + Psest_0367 0.59 -2.7 393,256 + Psest_0367 0.59 -0.4 393,620 + +1.7 393,620 + +1.6 393,620 + +1.5 393,621 - -2.6 393,621 - -1.9 393,718 + -1.5 393,718 + -0.2 393,718 + -1.5 393,718 + -2.0 393,718 + +2.1 393,737 - +3.4 393,737 - -2.3 393,740 + +1.1 393,740 + +3.0 393,740 + +0.5 393,740 + +3.2 393,741 - -2.2 393,741 - -1.1 393,741 - -1.4 393,741 - -0.4 393,749 + +1.1 393,750 - -1.3 393,750 - +5.5 393,750 - -2.7 393,750 - +0.2 393,952 + -0.4 394,102 - Psest_0368 0.17 -0.5 394,283 - Psest_0368 0.36 -1.9 394,749 + Psest_0368 0.87 -0.2 394,836 - -0.5 394,980 + -1.7 394,980 + -0.2 394,980 + +0.2 394,980 + -0.3 395,059 + +1.6 395,059 + -0.9 395,060 - -1.1 395,132 + Psest_0369 0.14 +0.7 395,133 - Psest_0369 0.14 -0.4 395,151 + Psest_0369 0.16 +1.8 395,151 + Psest_0369 0.16 -1.0 395,181 + Psest_0369 0.19 +0.8 395,182 - Psest_0369 0.19 -1.1 395,182 - Psest_0369 0.19 -0.1 395,406 + Psest_0369 0.38 -1.5 395,406 + Psest_0369 0.38 +0.4 395,406 + Psest_0369 0.38 +0.6 395,406 + Psest_0369 0.38 +0.8 395,406 + Psest_0369 0.38 +1.2 395,406 + Psest_0369 0.38 -0.5 395,407 - Psest_0369 0.38 +1.5 395,407 - Psest_0369 0.38 -1.1 395,407 - Psest_0369 0.38 -0.3 395,407 - Psest_0369 0.38 -0.5 395,407 - Psest_0369 0.38 -2.3
Or see this region's nucleotide sequence