Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1842 and Psest_1843 are separated by 80 nucleotides Psest_1843 and Psest_1844 are separated by 52 nucleotides Psest_1844 and Psest_1845 are separated by 292 nucleotides
Psest_1842: Psest_1842 - Chemotaxis signal transduction protein, at 1,946,180 to 1,947,112
_1842
Psest_1843: Psest_1843 - Uncharacterized Fe-S protein, at 1,947,193 to 1,947,993
_1843
Psest_1844: Psest_1844 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,948,046 to 1,949,968
_1844
Psest_1845: Psest_1845 - ATPase components of ABC transporters with duplicated ATPase domains, at 1,950,261 to 1,952,162
_1845
Position (kb) 1948
1949
1950 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1947.139 kb on + strand at 1947.139 kb on + strand at 1947.140 kb on - strand at 1947.158 kb on + strand at 1947.158 kb on + strand at 1947.159 kb on - strand at 1947.159 kb on - strand at 1947.595 kb on + strand, within Psest_1843 at 1947.703 kb on - strand, within Psest_1843 at 1947.759 kb on + strand, within Psest_1843 at 1948.047 kb on + strand at 1948.113 kb on + strand at 1948.113 kb on + strand at 1948.113 kb on + strand at 1948.114 kb on - strand at 1948.114 kb on - strand at 1948.126 kb on - strand at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.248 kb on + strand, within Psest_1844 at 1948.249 kb on - strand, within Psest_1844 at 1948.249 kb on - strand, within Psest_1844 at 1948.249 kb on - strand, within Psest_1844 at 1948.291 kb on - strand, within Psest_1844 at 1948.306 kb on - strand, within Psest_1844 at 1948.306 kb on - strand, within Psest_1844 at 1948.592 kb on + strand, within Psest_1844 at 1948.592 kb on + strand, within Psest_1844 at 1948.592 kb on + strand, within Psest_1844 at 1948.593 kb on - strand, within Psest_1844 at 1948.593 kb on - strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.614 kb on + strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.615 kb on - strand, within Psest_1844 at 1948.629 kb on + strand, within Psest_1844 at 1948.629 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.815 kb on + strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.816 kb on - strand, within Psest_1844 at 1948.881 kb on + strand, within Psest_1844 at 1949.076 kb on + strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.077 kb on - strand, within Psest_1844 at 1949.087 kb on + strand, within Psest_1844 at 1949.087 kb on + strand, within Psest_1844 at 1949.395 kb on - strand, within Psest_1844 at 1949.568 kb on + strand, within Psest_1844 at 1949.568 kb on + strand, within Psest_1844 at 1949.616 kb on + strand, within Psest_1844 at 1949.616 kb on + strand, within Psest_1844 at 1949.617 kb on - strand, within Psest_1844 at 1949.619 kb on + strand, within Psest_1844 at 1949.773 kb on - strand, within Psest_1844 at 1949.781 kb on + strand at 1949.781 kb on + strand at 1949.782 kb on - strand at 1949.871 kb on + strand at 1949.872 kb on - strand at 1949.874 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.971 kb on + strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.972 kb on - strand at 1949.979 kb on + strand at 1949.979 kb on + strand at 1949.980 kb on - strand at 1950.057 kb on + strand at 1950.057 kb on + strand at 1950.058 kb on - strand at 1950.089 kb on + strand at 1950.129 kb on + strand at 1950.129 kb on + strand at 1950.129 kb on + strand at 1950.129 kb on + strand at 1950.130 kb on - strand at 1950.130 kb on - strand at 1950.130 kb on - strand at 1950.190 kb on + strand at 1950.222 kb on + strand at 1950.222 kb on + strand at 1950.229 kb on + strand at 1950.229 kb on + strand at 1950.256 kb on + strand at 1950.257 kb on - strand at 1950.257 kb on - strand at 1950.257 kb on - strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.286 kb on + strand at 1950.287 kb on - strand at 1950.287 kb on - strand at 1950.287 kb on - strand at 1950.287 kb on - strand at 1950.707 kb on + strand, within Psest_1845 at 1950.707 kb on + strand, within Psest_1845 at 1950.707 kb on + strand, within Psest_1845 at 1950.745 kb on + strand, within Psest_1845 at 1950.746 kb on - strand, within Psest_1845 at 1950.785 kb on - strand, within Psest_1845 at 1950.963 kb on + strand, within Psest_1845
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,947,139 + -1.3 1,947,139 + -0.0 1,947,140 - -0.0 1,947,158 + -0.2 1,947,158 + +1.4 1,947,159 - -3.2 1,947,159 - -0.2 1,947,595 + Psest_1843 0.50 -2.4 1,947,703 - Psest_1843 0.64 +1.4 1,947,759 + Psest_1843 0.71 -0.6 1,948,047 + -2.9 1,948,113 + -1.5 1,948,113 + -0.5 1,948,113 + -0.0 1,948,114 - -0.6 1,948,114 - +2.1 1,948,126 - -1.0 1,948,248 + Psest_1844 0.11 -1.2 1,948,248 + Psest_1844 0.11 -1.4 1,948,248 + Psest_1844 0.11 -1.1 1,948,248 + Psest_1844 0.11 -1.3 1,948,248 + Psest_1844 0.11 +1.5 1,948,248 + Psest_1844 0.11 -1.9 1,948,248 + Psest_1844 0.11 +0.5 1,948,249 - Psest_1844 0.11 -0.5 1,948,249 - Psest_1844 0.11 -1.2 1,948,249 - Psest_1844 0.11 -1.3 1,948,291 - Psest_1844 0.13 -3.3 1,948,306 - Psest_1844 0.14 -1.4 1,948,306 - Psest_1844 0.14 -0.4 1,948,592 + Psest_1844 0.28 -2.3 1,948,592 + Psest_1844 0.28 +0.7 1,948,592 + Psest_1844 0.28 -0.5 1,948,593 - Psest_1844 0.28 -1.5 1,948,593 - Psest_1844 0.28 -0.9 1,948,614 + Psest_1844 0.30 -2.1 1,948,614 + Psest_1844 0.30 -1.3 1,948,614 + Psest_1844 0.30 -1.6 1,948,614 + Psest_1844 0.30 +0.1 1,948,614 + Psest_1844 0.30 +1.6 1,948,615 - Psest_1844 0.30 -1.1 1,948,615 - Psest_1844 0.30 -1.6 1,948,615 - Psest_1844 0.30 -3.7 1,948,615 - Psest_1844 0.30 -2.9 1,948,615 - Psest_1844 0.30 -1.4 1,948,629 + Psest_1844 0.30 -1.0 1,948,629 + Psest_1844 0.30 +0.8 1,948,815 + Psest_1844 0.40 -1.1 1,948,815 + Psest_1844 0.40 -0.7 1,948,815 + Psest_1844 0.40 +0.3 1,948,815 + Psest_1844 0.40 -1.1 1,948,815 + Psest_1844 0.40 -3.0 1,948,815 + Psest_1844 0.40 -1.9 1,948,815 + Psest_1844 0.40 -1.5 1,948,815 + Psest_1844 0.40 -0.7 1,948,815 + Psest_1844 0.40 -3.6 1,948,815 + Psest_1844 0.40 -1.4 1,948,815 + Psest_1844 0.40 -0.8 1,948,815 + Psest_1844 0.40 -1.2 1,948,815 + Psest_1844 0.40 -2.4 1,948,816 - Psest_1844 0.40 -0.7 1,948,816 - Psest_1844 0.40 -2.2 1,948,816 - Psest_1844 0.40 -1.3 1,948,816 - Psest_1844 0.40 -2.5 1,948,816 - Psest_1844 0.40 -1.7 1,948,816 - Psest_1844 0.40 +0.3 1,948,816 - Psest_1844 0.40 -1.3 1,948,816 - Psest_1844 0.40 -2.4 1,948,816 - Psest_1844 0.40 +0.6 1,948,816 - Psest_1844 0.40 +0.5 1,948,816 - Psest_1844 0.40 -2.4 1,948,881 + Psest_1844 0.43 -1.9 1,949,076 + Psest_1844 0.54 -1.1 1,949,077 - Psest_1844 0.54 +1.7 1,949,077 - Psest_1844 0.54 +1.2 1,949,077 - Psest_1844 0.54 -1.9 1,949,077 - Psest_1844 0.54 -0.8 1,949,077 - Psest_1844 0.54 -1.3 1,949,087 + Psest_1844 0.54 +1.9 1,949,087 + Psest_1844 0.54 -2.0 1,949,395 - Psest_1844 0.70 -2.3 1,949,568 + Psest_1844 0.79 +0.7 1,949,568 + Psest_1844 0.79 -1.2 1,949,616 + Psest_1844 0.82 -1.7 1,949,616 + Psest_1844 0.82 -0.6 1,949,617 - Psest_1844 0.82 -1.4 1,949,619 + Psest_1844 0.82 -1.8 1,949,773 - Psest_1844 0.90 +0.4 1,949,781 + +0.5 1,949,781 + -2.8 1,949,782 - -0.6 1,949,871 + +0.0 1,949,872 - -1.0 1,949,874 + -1.3 1,949,971 + -2.2 1,949,971 + -0.3 1,949,971 + -1.3 1,949,971 + +0.9 1,949,971 + -0.7 1,949,971 + +0.1 1,949,971 + -0.3 1,949,971 + +1.6 1,949,971 + -1.6 1,949,971 + -1.9 1,949,971 + +3.3 1,949,972 - -1.0 1,949,972 - -0.7 1,949,972 - -0.1 1,949,972 - +0.4 1,949,972 - +0.2 1,949,972 - +1.0 1,949,972 - +0.2 1,949,972 - -0.1 1,949,972 - -2.9 1,949,972 - +1.3 1,949,972 - +0.5 1,949,972 - -1.2 1,949,972 - -2.2 1,949,972 - +0.6 1,949,979 + -1.3 1,949,979 + -0.3 1,949,980 - -0.5 1,950,057 + -0.3 1,950,057 + -0.7 1,950,058 - +3.0 1,950,089 + +2.2 1,950,129 + +1.5 1,950,129 + -1.2 1,950,129 + -0.1 1,950,129 + -0.8 1,950,130 - +0.4 1,950,130 - -1.3 1,950,130 - +0.3 1,950,190 + +1.1 1,950,222 + -1.2 1,950,222 + +1.3 1,950,229 + -0.8 1,950,229 + +0.7 1,950,256 + -0.3 1,950,257 - +1.6 1,950,257 - -1.4 1,950,257 - +2.2 1,950,286 + -1.1 1,950,286 + -0.4 1,950,286 + +0.5 1,950,286 + +0.9 1,950,286 + +0.1 1,950,286 + -0.4 1,950,286 + +0.1 1,950,286 + +0.4 1,950,286 + -0.6 1,950,286 + -0.3 1,950,287 - -2.4 1,950,287 - +0.2 1,950,287 - -0.1 1,950,287 - +1.4 1,950,707 + Psest_1845 0.23 +1.1 1,950,707 + Psest_1845 0.23 -0.5 1,950,707 + Psest_1845 0.23 -0.4 1,950,745 + Psest_1845 0.25 -0.1 1,950,746 - Psest_1845 0.25 -0.0 1,950,785 - Psest_1845 0.28 -1.6 1,950,963 + Psest_1845 0.37 -0.8
Or see this region's nucleotide sequence