Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0452 and Psest_0453 overlap by 1 nucleotides Psest_0453 and Psest_0454 are separated by 43 nucleotides Psest_0454 and Psest_0455 are separated by 8 nucleotides
Psest_0452: Psest_0452 - lipopolysaccharide heptosyltransferase I, at 498,209 to 499,210
_0452
Psest_0453: Psest_0453 - Glycosyltransferase, at 499,210 to 500,331
_0453
Psest_0454: Psest_0454 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 500,375 to 501,181
_0454
Psest_0455: Psest_0455 - ADP-heptose:LPS heptosyltransferase, at 501,190 to 502,146
_0455
Position (kb) 499
500
501 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8
9 at 500.374 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.272 kb on + strand at 501.272 kb on + strand at 501.309 kb on + strand, within Psest_0455 at 501.309 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 500,374 + +1.2 501,236 + +2.7 501,236 + +3.2 501,236 + +3.0 501,236 + +2.3 501,251 + +6.9 501,251 + +7.3 501,251 + +5.4 501,251 + +8.0 501,251 + +5.1 501,251 + +5.0 501,251 + +4.0 501,253 + +4.5 501,253 + +5.0 501,253 + +8.6 501,253 + -0.2 501,253 + +3.9 501,253 + +4.2 501,253 + +4.4 501,253 + +3.8 501,253 + +6.6 501,253 + +9.7 501,253 + +4.8 501,253 + +2.4 501,253 + +3.5 501,272 + +8.3 501,272 + +8.5 501,309 + Psest_0455 0.12 +7.6 501,309 + Psest_0455 0.12 +4.0 501,318 + Psest_0455 0.13 +4.8 501,318 + Psest_0455 0.13 +5.1
Or see this region's nucleotide sequence