Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0319 and Psest_0320 are separated by 174 nucleotides Psest_0320 and Psest_0321 are separated by 12 nucleotides Psest_0321 and Psest_0322 are separated by 55 nucleotides
Psest_0319: Psest_0319 - Predicted ferric reductase, at 342,114 to 343,445
_0319
Psest_0320: Psest_0320 - ABC-type multidrug transport system, ATPase component, at 343,620 to 344,543
_0320
Psest_0321: Psest_0321 - Predicted membrane protein, at 344,556 to 345,317
_0321
Psest_0322: Psest_0322 - hypothetical protein, at 345,373 to 345,708
_0322
Position (kb) 343
344
345 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 342.720 kb on - strand, within Psest_0319 at 342.897 kb on + strand, within Psest_0319 at 342.898 kb on - strand, within Psest_0319 at 342.898 kb on - strand, within Psest_0319 at 342.898 kb on - strand, within Psest_0319 at 342.898 kb on - strand, within Psest_0319 at 342.925 kb on + strand, within Psest_0319 at 342.925 kb on + strand, within Psest_0319 at 342.926 kb on - strand, within Psest_0319 at 342.926 kb on - strand, within Psest_0319 at 342.926 kb on - strand, within Psest_0319 at 343.016 kb on - strand, within Psest_0319 at 343.222 kb on + strand, within Psest_0319 at 343.223 kb on - strand, within Psest_0319 at 343.321 kb on + strand at 343.321 kb on + strand at 343.322 kb on - strand at 343.322 kb on - strand at 343.322 kb on - strand at 343.322 kb on - strand at 343.423 kb on + strand at 343.423 kb on + strand at 343.424 kb on - strand at 343.424 kb on - strand at 343.424 kb on - strand at 343.424 kb on - strand at 343.434 kb on + strand at 343.434 kb on + strand at 343.434 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.496 kb on + strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.497 kb on - strand at 343.579 kb on + strand at 343.580 kb on - strand at 343.583 kb on + strand at 343.659 kb on + strand at 343.659 kb on + strand at 343.660 kb on - strand at 343.660 kb on - strand at 344.196 kb on + strand, within Psest_0320 at 344.196 kb on + strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.197 kb on - strand, within Psest_0320 at 344.565 kb on + strand at 344.583 kb on + strand at 344.583 kb on + strand at 344.583 kb on + strand at 344.584 kb on - strand at 344.584 kb on - strand at 344.584 kb on - strand at 344.584 kb on - strand at 344.658 kb on + strand, within Psest_0321 at 344.658 kb on + strand, within Psest_0321 at 344.659 kb on - strand, within Psest_0321 at 344.659 kb on - strand, within Psest_0321 at 344.659 kb on - strand, within Psest_0321 at 344.668 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.796 kb on + strand, within Psest_0321 at 344.797 kb on + strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.797 kb on - strand, within Psest_0321 at 344.823 kb on + strand, within Psest_0321 at 344.823 kb on + strand, within Psest_0321 at 344.823 kb on + strand, within Psest_0321 at 344.823 kb on + strand, within Psest_0321 at 344.823 kb on + strand, within Psest_0321 at 344.823 kb on + strand, within Psest_0321 at 344.824 kb on - strand, within Psest_0321 at 344.824 kb on - strand, within Psest_0321 at 344.850 kb on + strand, within Psest_0321 at 344.850 kb on + strand, within Psest_0321 at 344.851 kb on - strand, within Psest_0321 at 344.851 kb on - strand, within Psest_0321 at 344.851 kb on - strand, within Psest_0321 at 344.851 kb on - strand, within Psest_0321 at 344.946 kb on + strand, within Psest_0321 at 344.946 kb on + strand, within Psest_0321 at 345.111 kb on + strand, within Psest_0321 at 345.111 kb on + strand, within Psest_0321 at 345.111 kb on + strand, within Psest_0321 at 345.111 kb on + strand, within Psest_0321 at 345.111 kb on + strand, within Psest_0321 at 345.112 kb on - strand, within Psest_0321 at 345.112 kb on - strand, within Psest_0321 at 345.112 kb on - strand, within Psest_0321 at 345.171 kb on + strand, within Psest_0321 at 345.171 kb on + strand, within Psest_0321 at 345.172 kb on - strand, within Psest_0321 at 345.172 kb on - strand, within Psest_0321 at 345.172 kb on - strand, within Psest_0321 at 345.172 kb on - strand, within Psest_0321 at 345.172 kb on - strand, within Psest_0321 at 345.201 kb on + strand, within Psest_0321 at 345.201 kb on + strand, within Psest_0321 at 345.201 kb on + strand, within Psest_0321 at 345.201 kb on + strand, within Psest_0321 at 345.201 kb on + strand, within Psest_0321 at 345.202 kb on - strand, within Psest_0321 at 345.202 kb on - strand, within Psest_0321 at 345.358 kb on + strand at 345.358 kb on + strand at 345.359 kb on - strand at 345.359 kb on - strand at 345.374 kb on + strand at 345.374 kb on + strand at 345.374 kb on + strand at 345.374 kb on + strand at 345.374 kb on + strand at 345.374 kb on + strand at 345.374 kb on + strand at 345.375 kb on - strand at 345.375 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 342,720 - Psest_0319 0.45 -0.4 342,897 + Psest_0319 0.59 -1.0 342,898 - Psest_0319 0.59 -0.4 342,898 - Psest_0319 0.59 -2.3 342,898 - Psest_0319 0.59 -0.5 342,898 - Psest_0319 0.59 -2.3 342,925 + Psest_0319 0.61 -2.2 342,925 + Psest_0319 0.61 -1.5 342,926 - Psest_0319 0.61 -3.7 342,926 - Psest_0319 0.61 -0.7 342,926 - Psest_0319 0.61 -1.6 343,016 - Psest_0319 0.68 -1.1 343,222 + Psest_0319 0.83 -0.4 343,223 - Psest_0319 0.83 -1.2 343,321 + -1.4 343,321 + -2.8 343,322 - -1.7 343,322 - -1.1 343,322 - +0.9 343,322 - -0.3 343,423 + -0.0 343,423 + +0.0 343,424 - -1.4 343,424 - -1.3 343,424 - -1.7 343,424 - -1.7 343,434 + -1.1 343,434 + +1.0 343,434 + -2.0 343,496 + -2.3 343,496 + -0.2 343,496 + -1.7 343,496 + +0.4 343,496 + +0.4 343,496 + -1.4 343,496 + -0.8 343,496 + +0.2 343,496 + +0.6 343,496 + +1.7 343,496 + -0.2 343,496 + -1.9 343,496 + -3.3 343,496 + -0.9 343,496 + -2.0 343,496 + +1.1 343,496 + -1.4 343,496 + -1.6 343,496 + +0.3 343,496 + -0.1 343,496 + -0.5 343,496 + -0.4 343,496 + -0.5 343,496 + +2.7 343,496 + -1.1 343,496 + -0.3 343,496 + +0.2 343,496 + -0.5 343,496 + -0.9 343,496 + +0.6 343,496 + -1.5 343,496 + +1.0 343,496 + +0.8 343,496 + -0.9 343,496 + -1.5 343,497 - -2.1 343,497 - +1.2 343,497 - -1.2 343,497 - -0.8 343,497 - -1.7 343,497 - -0.1 343,497 - -0.3 343,497 - -0.6 343,497 - -1.7 343,497 - +0.1 343,497 - -3.1 343,497 - +0.5 343,497 - -1.4 343,497 - +1.3 343,497 - +0.3 343,497 - +1.7 343,497 - +0.8 343,497 - +0.7 343,497 - -0.3 343,497 - -0.5 343,497 - +0.6 343,497 - +1.5 343,497 - -0.5 343,497 - -1.7 343,497 - -0.8 343,497 - -0.4 343,497 - -2.4 343,497 - +0.3 343,497 - -0.7 343,497 - +0.5 343,497 - -0.7 343,497 - +1.5 343,579 + -0.6 343,580 - +0.1 343,583 + -2.1 343,659 + -2.0 343,659 + -2.3 343,660 - -1.2 343,660 - +2.7 344,196 + Psest_0320 0.62 -1.4 344,196 + Psest_0320 0.62 -0.8 344,197 - Psest_0320 0.62 +0.3 344,197 - Psest_0320 0.62 +0.2 344,197 - Psest_0320 0.62 -1.7 344,197 - Psest_0320 0.62 -0.2 344,197 - Psest_0320 0.62 -0.3 344,197 - Psest_0320 0.62 +0.7 344,197 - Psest_0320 0.62 -1.7 344,565 + +0.2 344,583 + -0.4 344,583 + +1.5 344,583 + -0.0 344,584 - -0.3 344,584 - -2.6 344,584 - +1.2 344,584 - +0.4 344,658 + Psest_0321 0.13 -0.2 344,658 + Psest_0321 0.13 -1.0 344,659 - Psest_0321 0.14 +0.5 344,659 - Psest_0321 0.14 -0.2 344,659 - Psest_0321 0.14 -0.1 344,668 + Psest_0321 0.15 +0.8 344,796 + Psest_0321 0.31 +1.7 344,796 + Psest_0321 0.31 -1.6 344,796 + Psest_0321 0.31 -0.3 344,796 + Psest_0321 0.31 -1.7 344,796 + Psest_0321 0.31 +0.1 344,796 + Psest_0321 0.31 +0.4 344,796 + Psest_0321 0.31 +1.6 344,796 + Psest_0321 0.31 +0.6 344,796 + Psest_0321 0.31 +0.1 344,796 + Psest_0321 0.31 +4.2 344,796 + Psest_0321 0.31 -1.1 344,796 + Psest_0321 0.31 +2.0 344,796 + Psest_0321 0.31 +0.1 344,796 + Psest_0321 0.31 +3.8 344,796 + Psest_0321 0.31 -1.0 344,796 + Psest_0321 0.31 -0.1 344,796 + Psest_0321 0.31 +0.8 344,796 + Psest_0321 0.31 +0.2 344,796 + Psest_0321 0.31 +3.8 344,797 + Psest_0321 0.32 -1.5 344,797 - Psest_0321 0.32 -1.5 344,797 - Psest_0321 0.32 +1.6 344,797 - Psest_0321 0.32 +0.5 344,797 - Psest_0321 0.32 -1.6 344,797 - Psest_0321 0.32 -1.0 344,797 - Psest_0321 0.32 -0.4 344,797 - Psest_0321 0.32 +0.4 344,797 - Psest_0321 0.32 -0.8 344,797 - Psest_0321 0.32 +0.2 344,797 - Psest_0321 0.32 +0.4 344,797 - Psest_0321 0.32 +1.9 344,797 - Psest_0321 0.32 +1.7 344,797 - Psest_0321 0.32 -1.0 344,797 - Psest_0321 0.32 +0.1 344,797 - Psest_0321 0.32 +0.0 344,823 + Psest_0321 0.35 +0.9 344,823 + Psest_0321 0.35 -0.7 344,823 + Psest_0321 0.35 -2.4 344,823 + Psest_0321 0.35 +1.5 344,823 + Psest_0321 0.35 -0.2 344,823 + Psest_0321 0.35 +0.8 344,824 - Psest_0321 0.35 +0.4 344,824 - Psest_0321 0.35 -1.6 344,850 + Psest_0321 0.39 +1.1 344,850 + Psest_0321 0.39 -1.5 344,851 - Psest_0321 0.39 -0.7 344,851 - Psest_0321 0.39 +0.6 344,851 - Psest_0321 0.39 +1.3 344,851 - Psest_0321 0.39 +0.4 344,946 + Psest_0321 0.51 -1.4 344,946 + Psest_0321 0.51 -2.3 345,111 + Psest_0321 0.73 +0.3 345,111 + Psest_0321 0.73 -0.7 345,111 + Psest_0321 0.73 +1.5 345,111 + Psest_0321 0.73 +0.4 345,111 + Psest_0321 0.73 -1.0 345,112 - Psest_0321 0.73 +0.3 345,112 - Psest_0321 0.73 -1.0 345,112 - Psest_0321 0.73 +4.1 345,171 + Psest_0321 0.81 +1.1 345,171 + Psest_0321 0.81 +1.3 345,172 - Psest_0321 0.81 +1.3 345,172 - Psest_0321 0.81 +0.6 345,172 - Psest_0321 0.81 +0.8 345,172 - Psest_0321 0.81 +0.5 345,172 - Psest_0321 0.81 -0.2 345,201 + Psest_0321 0.85 +2.7 345,201 + Psest_0321 0.85 -1.2 345,201 + Psest_0321 0.85 +0.1 345,201 + Psest_0321 0.85 -2.8 345,201 + Psest_0321 0.85 +0.4 345,202 - Psest_0321 0.85 +0.9 345,202 - Psest_0321 0.85 +0.6 345,358 + -2.4 345,358 + -0.1 345,359 - -0.6 345,359 - -2.2 345,374 + +0.2 345,374 + +1.1 345,374 + +1.1 345,374 + +0.0 345,374 + -1.4 345,374 + -0.5 345,374 + -0.9 345,375 - -1.5 345,375 - -1.2
Or see this region's nucleotide sequence