Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3666 and Psest_3667 are separated by 110 nucleotides Psest_3667 and Psest_3668 are separated by 114 nucleotides Psest_3668 and Psest_3669 are separated by 33 nucleotides
Psest_3666: Psest_3666 - Parvulin-like peptidyl-prolyl isomerase, at 3,830,086 to 3,831,399
_3666
Psest_3667: Psest_3667 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 3,831,510 to 3,832,502
_3667
Psest_3668: Psest_3668 - dimethyladenosine transferase, at 3,832,617 to 3,833,411
_3668
Psest_3669: Psest_3669 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 3,833,445 to 3,833,828
_3669
Position (kb)
3831
3832
3833 Strain fitness (log2 ratio)
-2
-1
0
1 at 3831.397 kb on + strand at 3831.398 kb on - strand at 3831.398 kb on - strand at 3831.408 kb on + strand at 3831.408 kb on + strand at 3831.408 kb on + strand at 3831.408 kb on + strand at 3831.409 kb on - strand at 3831.409 kb on - strand at 3831.409 kb on - strand at 3831.417 kb on + strand at 3831.417 kb on + strand at 3831.417 kb on + strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.418 kb on - strand at 3831.422 kb on + strand at 3832.551 kb on - strand at 3832.551 kb on - strand at 3832.555 kb on + strand at 3832.950 kb on + strand, within Psest_3668 at 3833.405 kb on + strand at 3833.405 kb on + strand at 3833.405 kb on + strand at 3833.406 kb on - strand at 3833.406 kb on - strand at 3833.406 kb on - strand at 3833.410 kb on - strand at 3833.456 kb on + strand at 3833.456 kb on + strand at 3833.457 kb on - strand at 3833.457 kb on - strand at 3833.463 kb on + strand at 3833.463 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 3,831,397 + -0.5 3,831,398 - -0.0 3,831,398 - +0.2 3,831,408 + +0.0 3,831,408 + +0.9 3,831,408 + -1.6 3,831,408 + -2.4 3,831,409 - -0.2 3,831,409 - -0.6 3,831,409 - -1.5 3,831,417 + +0.6 3,831,417 + -0.5 3,831,417 + -0.4 3,831,418 - -0.0 3,831,418 - +0.6 3,831,418 - -0.1 3,831,418 - -1.4 3,831,418 - -0.1 3,831,418 - -0.5 3,831,418 - -1.6 3,831,418 - +0.6 3,831,418 - -1.5 3,831,418 - -0.4 3,831,418 - +0.3 3,831,422 + +0.8 3,832,551 - +0.3 3,832,551 - +0.7 3,832,555 + +0.4 3,832,950 + Psest_3668 0.42 -0.1 3,833,405 + +0.4 3,833,405 + +1.7 3,833,405 + +0.2 3,833,406 - -0.2 3,833,406 - +0.5 3,833,406 - +1.0 3,833,410 - +0.1 3,833,456 + -0.5 3,833,456 + -1.6 3,833,457 - +0.2 3,833,457 - -1.2 3,833,463 + -0.2 3,833,463 + -0.7
Or see this region's nucleotide sequence