Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4275 and Psest_4276 overlap by 1 nucleotides Psest_4276 and Psest_4277 overlap by 4 nucleotides Psest_4277 and Psest_4278 overlap by 4 nucleotides
Psest_4275: Psest_4275 - Outer membrane receptor for ferrienterochelin and colicins, at 4,465,207 to 4,467,270
_4275
Psest_4276: Psest_4276 - hypothetical protein, at 4,467,270 to 4,468,262
_4276
Psest_4277: Psest_4277 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 4,468,259 to 4,469,050
_4277
Psest_4278: Psest_4278 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 4,469,047 to 4,469,871
_4278
Position (kb)
4467
4468
4469 Strain fitness (log2 ratio)
-2
-1
0
1 at 4466.279 kb on - strand, within Psest_4275 at 4466.279 kb on - strand, within Psest_4275 at 4466.279 kb on - strand, within Psest_4275 at 4466.351 kb on - strand, within Psest_4275 at 4466.464 kb on - strand, within Psest_4275 at 4466.464 kb on - strand, within Psest_4275 at 4466.464 kb on - strand, within Psest_4275 at 4466.464 kb on - strand, within Psest_4275 at 4466.623 kb on + strand, within Psest_4275 at 4466.746 kb on + strand, within Psest_4275 at 4466.746 kb on + strand, within Psest_4275 at 4466.746 kb on + strand, within Psest_4275 at 4466.747 kb on - strand, within Psest_4275 at 4466.747 kb on - strand, within Psest_4275 at 4466.830 kb on + strand, within Psest_4275 at 4466.830 kb on + strand, within Psest_4275 at 4466.830 kb on + strand, within Psest_4275 at 4466.830 kb on + strand, within Psest_4275 at 4466.831 kb on - strand, within Psest_4275 at 4466.831 kb on - strand, within Psest_4275 at 4467.146 kb on + strand at 4467.146 kb on + strand at 4467.146 kb on + strand at 4467.147 kb on - strand at 4467.147 kb on - strand at 4467.147 kb on - strand at 4467.182 kb on - strand at 4467.283 kb on + strand at 4467.283 kb on + strand at 4467.283 kb on + strand at 4467.283 kb on + strand at 4467.283 kb on + strand at 4467.284 kb on - strand at 4467.284 kb on - strand at 4467.284 kb on - strand at 4467.284 kb on - strand at 4467.284 kb on - strand at 4467.531 kb on + strand, within Psest_4276 at 4467.532 kb on - strand, within Psest_4276 at 4467.532 kb on - strand, within Psest_4276 at 4467.739 kb on - strand, within Psest_4276 at 4467.769 kb on + strand, within Psest_4276 at 4467.769 kb on + strand, within Psest_4276 at 4468.009 kb on - strand, within Psest_4276 at 4468.009 kb on - strand, within Psest_4276 at 4468.009 kb on - strand, within Psest_4276 at 4468.236 kb on + strand at 4468.236 kb on + strand at 4468.236 kb on + strand at 4468.236 kb on + strand at 4468.236 kb on + strand at 4468.237 kb on - strand at 4468.237 kb on - strand at 4468.374 kb on - strand, within Psest_4277 at 4468.394 kb on - strand, within Psest_4277 at 4468.492 kb on + strand, within Psest_4277 at 4468.492 kb on + strand, within Psest_4277 at 4468.492 kb on + strand, within Psest_4277 at 4468.492 kb on + strand, within Psest_4277 at 4468.492 kb on + strand, within Psest_4277 at 4468.493 kb on - strand, within Psest_4277 at 4468.493 kb on - strand, within Psest_4277 at 4468.493 kb on - strand, within Psest_4277 at 4468.493 kb on - strand, within Psest_4277 at 4468.790 kb on + strand, within Psest_4277 at 4468.791 kb on - strand, within Psest_4277 at 4468.791 kb on - strand, within Psest_4277 at 4468.791 kb on - strand, within Psest_4277 at 4468.791 kb on - strand, within Psest_4277 at 4468.791 kb on - strand, within Psest_4277 at 4468.791 kb on - strand, within Psest_4277 at 4468.811 kb on + strand, within Psest_4277 at 4468.811 kb on + strand, within Psest_4277 at 4468.812 kb on - strand, within Psest_4277 at 4468.991 kb on + strand at 4468.991 kb on + strand at 4468.991 kb on + strand at 4468.992 kb on - strand at 4468.992 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 4,466,279 - Psest_4275 0.52 -0.9 4,466,279 - Psest_4275 0.52 +1.3 4,466,279 - Psest_4275 0.52 +0.3 4,466,351 - Psest_4275 0.55 -0.9 4,466,464 - Psest_4275 0.61 +0.5 4,466,464 - Psest_4275 0.61 +1.3 4,466,464 - Psest_4275 0.61 -0.6 4,466,464 - Psest_4275 0.61 -1.3 4,466,623 + Psest_4275 0.69 -0.6 4,466,746 + Psest_4275 0.75 -1.6 4,466,746 + Psest_4275 0.75 +0.4 4,466,746 + Psest_4275 0.75 +0.3 4,466,747 - Psest_4275 0.75 +0.7 4,466,747 - Psest_4275 0.75 +0.2 4,466,830 + Psest_4275 0.79 -1.1 4,466,830 + Psest_4275 0.79 +1.1 4,466,830 + Psest_4275 0.79 +1.1 4,466,830 + Psest_4275 0.79 -1.0 4,466,831 - Psest_4275 0.79 +0.9 4,466,831 - Psest_4275 0.79 +0.7 4,467,146 + -0.4 4,467,146 + +0.0 4,467,146 + -0.4 4,467,147 - +0.4 4,467,147 - +0.1 4,467,147 - +1.4 4,467,182 - -0.2 4,467,283 + -1.0 4,467,283 + +0.3 4,467,283 + -0.5 4,467,283 + +0.2 4,467,283 + +0.3 4,467,284 - -0.0 4,467,284 - -2.1 4,467,284 - -0.5 4,467,284 - +0.2 4,467,284 - -0.3 4,467,531 + Psest_4276 0.26 -0.5 4,467,532 - Psest_4276 0.26 -0.4 4,467,532 - Psest_4276 0.26 -0.8 4,467,739 - Psest_4276 0.47 -1.5 4,467,769 + Psest_4276 0.50 -1.5 4,467,769 + Psest_4276 0.50 +0.3 4,468,009 - Psest_4276 0.74 -1.9 4,468,009 - Psest_4276 0.74 +1.0 4,468,009 - Psest_4276 0.74 -2.6 4,468,236 + -1.7 4,468,236 + -0.3 4,468,236 + -1.2 4,468,236 + +0.0 4,468,236 + -1.2 4,468,237 - +1.1 4,468,237 - +1.1 4,468,374 - Psest_4277 0.15 +0.9 4,468,394 - Psest_4277 0.17 -1.0 4,468,492 + Psest_4277 0.29 +0.4 4,468,492 + Psest_4277 0.29 -0.1 4,468,492 + Psest_4277 0.29 +0.7 4,468,492 + Psest_4277 0.29 -0.5 4,468,492 + Psest_4277 0.29 +0.1 4,468,493 - Psest_4277 0.30 -0.3 4,468,493 - Psest_4277 0.30 +0.8 4,468,493 - Psest_4277 0.30 -0.5 4,468,493 - Psest_4277 0.30 +1.5 4,468,790 + Psest_4277 0.67 +0.2 4,468,791 - Psest_4277 0.67 +0.4 4,468,791 - Psest_4277 0.67 -0.5 4,468,791 - Psest_4277 0.67 -1.6 4,468,791 - Psest_4277 0.67 -0.1 4,468,791 - Psest_4277 0.67 -1.2 4,468,791 - Psest_4277 0.67 +0.7 4,468,811 + Psest_4277 0.70 +0.2 4,468,811 + Psest_4277 0.70 -1.6 4,468,812 - Psest_4277 0.70 +0.0 4,468,991 + +0.6 4,468,991 + -1.7 4,468,991 + +0.1 4,468,992 - -0.5 4,468,992 - -0.1
Or see this region's nucleotide sequence