Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2329 and Psest_2330 are separated by 169 nucleotides Psest_2330 and Psest_2331 are separated by 261 nucleotides
Psest_2329: Psest_2329 - Transcriptional regulator, at 2,483,256 to 2,484,230
_2329
Psest_2330: Psest_2330 - 2-dehydropantoate 2-reductase, at 2,484,400 to 2,485,356
_2330
Psest_2331: Psest_2331 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 2,485,618 to 2,486,694
_2331
Position (kb)
2484
2485
2486 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2483.496 kb on - strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.610 kb on + strand, within Psest_2329 at 2483.611 kb on - strand, within Psest_2329 at 2483.611 kb on - strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.875 kb on + strand, within Psest_2329 at 2483.876 kb on - strand, within Psest_2329 at 2483.876 kb on - strand, within Psest_2329 at 2484.149 kb on + strand at 2484.149 kb on + strand at 2484.149 kb on + strand at 2484.150 kb on - strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.209 kb on - strand at 2484.209 kb on - strand at 2484.209 kb on - strand at 2484.209 kb on - strand at 2484.230 kb on + strand at 2484.230 kb on + strand at 2484.231 kb on - strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.276 kb on + strand at 2484.277 kb on - strand at 2484.305 kb on + strand at 2484.305 kb on + strand at 2484.306 kb on - strand at 2484.306 kb on - strand at 2484.441 kb on - strand at 2484.472 kb on + strand at 2484.473 kb on - strand at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.548 kb on + strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.563 kb on + strand, within Psest_2330 at 2484.564 kb on - strand, within Psest_2330 at 2484.621 kb on + strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.712 kb on - strand, within Psest_2330 at 2484.749 kb on - strand, within Psest_2330 at 2484.991 kb on - strand, within Psest_2330 at 2484.997 kb on + strand, within Psest_2330 at 2484.997 kb on + strand, within Psest_2330 at 2484.997 kb on + strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2485.001 kb on + strand, within Psest_2330 at 2485.001 kb on + strand, within Psest_2330 at 2485.001 kb on + strand, within Psest_2330 at 2485.002 kb on - strand, within Psest_2330 at 2485.002 kb on - strand, within Psest_2330 at 2485.163 kb on + strand, within Psest_2330 at 2485.298 kb on + strand at 2485.298 kb on + strand at 2485.298 kb on + strand at 2485.299 kb on - strand at 2485.299 kb on - strand at 2485.356 kb on + strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.357 kb on - strand at 2485.488 kb on - strand at 2485.558 kb on + strand at 2485.558 kb on + strand at 2485.558 kb on + strand at 2485.559 kb on - strand at 2485.559 kb on - strand at 2485.559 kb on - strand at 2485.559 kb on - strand at 2485.612 kb on + strand at 2485.613 kb on - strand at 2485.629 kb on - strand at 2485.667 kb on + strand at 2485.869 kb on - strand, within Psest_2331 at 2485.901 kb on - strand, within Psest_2331 at 2485.921 kb on - strand, within Psest_2331 at 2485.954 kb on + strand, within Psest_2331 at 2485.954 kb on + strand, within Psest_2331 at 2485.954 kb on + strand, within Psest_2331 at 2485.954 kb on + strand, within Psest_2331 at 2485.955 kb on - strand, within Psest_2331 at 2485.955 kb on - strand, within Psest_2331 at 2485.957 kb on - strand, within Psest_2331 at 2486.074 kb on + strand, within Psest_2331 at 2486.075 kb on - strand, within Psest_2331 at 2486.075 kb on - strand, within Psest_2331 at 2486.075 kb on - strand, within Psest_2331 at 2486.303 kb on - strand, within Psest_2331 at 2486.303 kb on - strand, within Psest_2331 at 2486.340 kb on + strand, within Psest_2331 at 2486.340 kb on + strand, within Psest_2331 at 2486.341 kb on - strand, within Psest_2331 at 2486.344 kb on + strand, within Psest_2331 at 2486.345 kb on - strand, within Psest_2331 at 2486.345 kb on - strand, within Psest_2331 at 2486.345 kb on - strand, within Psest_2331 at 2486.345 kb on - strand, within Psest_2331 at 2486.345 kb on - strand, within Psest_2331
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 2,483,496 - Psest_2329 0.25 -0.6 2,483,533 + Psest_2329 0.28 -0.3 2,483,533 + Psest_2329 0.28 +0.4 2,483,533 + Psest_2329 0.28 -1.2 2,483,533 + Psest_2329 0.28 -1.1 2,483,533 + Psest_2329 0.28 -2.8 2,483,533 + Psest_2329 0.28 -0.7 2,483,533 + Psest_2329 0.28 +0.2 2,483,533 + Psest_2329 0.28 -0.4 2,483,533 + Psest_2329 0.28 +0.7 2,483,533 + Psest_2329 0.28 -0.6 2,483,534 - Psest_2329 0.29 -0.3 2,483,534 - Psest_2329 0.29 -0.8 2,483,534 - Psest_2329 0.29 -0.4 2,483,534 - Psest_2329 0.29 -0.2 2,483,534 - Psest_2329 0.29 -0.1 2,483,534 - Psest_2329 0.29 -1.2 2,483,534 - Psest_2329 0.29 -0.7 2,483,534 - Psest_2329 0.29 -0.8 2,483,534 - Psest_2329 0.29 -0.8 2,483,534 - Psest_2329 0.29 -0.3 2,483,534 - Psest_2329 0.29 -0.6 2,483,534 - Psest_2329 0.29 -1.8 2,483,534 - Psest_2329 0.29 -0.5 2,483,534 - Psest_2329 0.29 +0.0 2,483,610 + Psest_2329 0.36 +0.7 2,483,611 - Psest_2329 0.36 -0.3 2,483,611 - Psest_2329 0.36 -1.3 2,483,641 + Psest_2329 0.39 -1.7 2,483,641 + Psest_2329 0.39 -0.4 2,483,641 + Psest_2329 0.39 -1.5 2,483,641 + Psest_2329 0.39 -0.9 2,483,641 + Psest_2329 0.39 +0.1 2,483,641 + Psest_2329 0.39 +0.7 2,483,641 + Psest_2329 0.39 -0.6 2,483,641 + Psest_2329 0.39 -0.1 2,483,641 + Psest_2329 0.39 -1.0 2,483,642 - Psest_2329 0.40 -0.3 2,483,642 - Psest_2329 0.40 -0.3 2,483,642 - Psest_2329 0.40 +0.3 2,483,642 - Psest_2329 0.40 -1.6 2,483,642 - Psest_2329 0.40 -0.3 2,483,642 - Psest_2329 0.40 -1.2 2,483,642 - Psest_2329 0.40 -0.1 2,483,642 - Psest_2329 0.40 -0.8 2,483,855 + Psest_2329 0.61 -0.7 2,483,855 + Psest_2329 0.61 -0.9 2,483,855 + Psest_2329 0.61 -0.5 2,483,855 + Psest_2329 0.61 -0.1 2,483,856 - Psest_2329 0.62 -1.2 2,483,856 - Psest_2329 0.62 -0.0 2,483,856 - Psest_2329 0.62 -2.2 2,483,856 - Psest_2329 0.62 -1.2 2,483,856 - Psest_2329 0.62 -1.3 2,483,856 - Psest_2329 0.62 +0.7 2,483,856 - Psest_2329 0.62 -0.4 2,483,856 - Psest_2329 0.62 -0.9 2,483,856 - Psest_2329 0.62 -0.6 2,483,875 + Psest_2329 0.63 -1.3 2,483,876 - Psest_2329 0.64 -0.5 2,483,876 - Psest_2329 0.64 -0.8 2,484,149 + -0.6 2,484,149 + +0.1 2,484,149 + -1.3 2,484,150 - -0.2 2,484,208 + +0.8 2,484,208 + -1.6 2,484,208 + -0.3 2,484,208 + -1.4 2,484,208 + +0.1 2,484,208 + -1.3 2,484,209 - -0.6 2,484,209 - -0.1 2,484,209 - -0.0 2,484,209 - -1.9 2,484,230 + +0.2 2,484,230 + +0.5 2,484,231 - +0.2 2,484,274 + -0.2 2,484,274 + -1.1 2,484,274 + +0.3 2,484,274 + -0.0 2,484,274 + +0.7 2,484,274 + +0.2 2,484,275 - +0.2 2,484,275 - -0.0 2,484,275 - -1.0 2,484,275 - +0.2 2,484,275 - +1.0 2,484,275 - +0.6 2,484,275 - -0.6 2,484,276 + -2.2 2,484,277 - -0.4 2,484,305 + -0.9 2,484,305 + +0.6 2,484,306 - +0.8 2,484,306 - -0.6 2,484,441 - -0.0 2,484,472 + +0.1 2,484,473 - -0.2 2,484,503 + Psest_2330 0.11 -0.3 2,484,503 + Psest_2330 0.11 +0.5 2,484,503 + Psest_2330 0.11 -0.4 2,484,503 + Psest_2330 0.11 +0.2 2,484,503 + Psest_2330 0.11 +0.2 2,484,503 + Psest_2330 0.11 +0.6 2,484,504 - Psest_2330 0.11 -1.6 2,484,504 - Psest_2330 0.11 -0.1 2,484,504 - Psest_2330 0.11 -0.2 2,484,504 - Psest_2330 0.11 -0.9 2,484,504 - Psest_2330 0.11 -0.8 2,484,504 - Psest_2330 0.11 -0.3 2,484,504 - Psest_2330 0.11 -0.7 2,484,504 - Psest_2330 0.11 +0.7 2,484,504 - Psest_2330 0.11 -1.0 2,484,504 - Psest_2330 0.11 +0.6 2,484,504 - Psest_2330 0.11 -0.0 2,484,548 + Psest_2330 0.15 +0.2 2,484,549 - Psest_2330 0.16 -0.4 2,484,549 - Psest_2330 0.16 -0.2 2,484,549 - Psest_2330 0.16 +0.6 2,484,549 - Psest_2330 0.16 -0.1 2,484,549 - Psest_2330 0.16 -0.2 2,484,549 - Psest_2330 0.16 -0.3 2,484,563 + Psest_2330 0.17 +0.4 2,484,564 - Psest_2330 0.17 +1.2 2,484,621 + Psest_2330 0.23 -0.3 2,484,622 - Psest_2330 0.23 -0.9 2,484,622 - Psest_2330 0.23 +0.1 2,484,622 - Psest_2330 0.23 -0.8 2,484,622 - Psest_2330 0.23 +0.7 2,484,622 - Psest_2330 0.23 -0.8 2,484,712 - Psest_2330 0.33 -0.2 2,484,749 - Psest_2330 0.36 -0.4 2,484,991 - Psest_2330 0.62 -0.9 2,484,997 + Psest_2330 0.62 -0.7 2,484,997 + Psest_2330 0.62 +0.4 2,484,997 + Psest_2330 0.62 -0.4 2,484,998 - Psest_2330 0.62 +0.1 2,484,998 - Psest_2330 0.62 -0.2 2,484,998 - Psest_2330 0.62 -0.3 2,484,998 - Psest_2330 0.62 +0.1 2,484,998 - Psest_2330 0.62 -0.6 2,484,998 - Psest_2330 0.62 -0.1 2,484,998 - Psest_2330 0.62 +0.0 2,484,998 - Psest_2330 0.62 -0.2 2,484,998 - Psest_2330 0.62 -1.2 2,484,998 - Psest_2330 0.62 -0.2 2,485,001 + Psest_2330 0.63 -0.2 2,485,001 + Psest_2330 0.63 +0.3 2,485,001 + Psest_2330 0.63 -0.8 2,485,002 - Psest_2330 0.63 -0.8 2,485,002 - Psest_2330 0.63 -0.1 2,485,163 + Psest_2330 0.80 -1.3 2,485,298 + -1.7 2,485,298 + -0.1 2,485,298 + -0.5 2,485,299 - +1.2 2,485,299 - +0.2 2,485,356 + +0.3 2,485,357 - -0.2 2,485,357 - +0.3 2,485,357 - -0.2 2,485,357 - -0.0 2,485,357 - -0.6 2,485,357 - +0.2 2,485,357 - +0.9 2,485,357 - +1.7 2,485,357 - -0.0 2,485,357 - -1.0 2,485,357 - -0.8 2,485,488 - -1.0 2,485,558 + -0.3 2,485,558 + -0.4 2,485,558 + +0.3 2,485,559 - -0.4 2,485,559 - -0.5 2,485,559 - -0.2 2,485,559 - +1.2 2,485,612 + +0.4 2,485,613 - +0.8 2,485,629 - -1.5 2,485,667 + -0.5 2,485,869 - Psest_2331 0.23 +0.1 2,485,901 - Psest_2331 0.26 -0.4 2,485,921 - Psest_2331 0.28 +0.5 2,485,954 + Psest_2331 0.31 +0.3 2,485,954 + Psest_2331 0.31 +0.3 2,485,954 + Psest_2331 0.31 -0.0 2,485,954 + Psest_2331 0.31 +1.4 2,485,955 - Psest_2331 0.31 -0.3 2,485,955 - Psest_2331 0.31 -0.1 2,485,957 - Psest_2331 0.31 -0.3 2,486,074 + Psest_2331 0.42 -0.9 2,486,075 - Psest_2331 0.42 +0.2 2,486,075 - Psest_2331 0.42 +0.1 2,486,075 - Psest_2331 0.42 +0.1 2,486,303 - Psest_2331 0.64 +0.6 2,486,303 - Psest_2331 0.64 +0.2 2,486,340 + Psest_2331 0.67 +0.7 2,486,340 + Psest_2331 0.67 +0.5 2,486,341 - Psest_2331 0.67 -0.6 2,486,344 + Psest_2331 0.67 -0.9 2,486,345 - Psest_2331 0.68 +0.7 2,486,345 - Psest_2331 0.68 -1.8 2,486,345 - Psest_2331 0.68 +0.1 2,486,345 - Psest_2331 0.68 -0.0 2,486,345 - Psest_2331 0.68 +0.2
Or see this region's nucleotide sequence