Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1527 and Psest_1528 are separated by 270 nucleotides Psest_1528 and Psest_1529 are separated by 157 nucleotides Psest_1529 and Psest_1530 overlap by 4 nucleotides
Psest_1527: Psest_1527 - Na+/proline symporter, at 1,627,138 to 1,630,605
_1527
Psest_1528: Psest_1528 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 1,630,876 to 1,631,436
_1528
Psest_1529: Psest_1529 - Predicted branched-chain amino acid permease (azaleucine resistance), at 1,631,594 to 1,632,310
_1529
Psest_1530: Psest_1530 - Predicted membrane protein, at 1,632,307 to 1,632,633
_1530
Position (kb)
1630
1631
1632 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1629.956 kb on + strand, within Psest_1527 at 1630.214 kb on + strand, within Psest_1527 at 1630.214 kb on + strand, within Psest_1527 at 1630.214 kb on + strand, within Psest_1527 at 1630.214 kb on + strand, within Psest_1527 at 1630.214 kb on + strand, within Psest_1527 at 1630.214 kb on + strand, within Psest_1527 at 1630.215 kb on - strand, within Psest_1527 at 1630.215 kb on - strand, within Psest_1527 at 1630.215 kb on - strand, within Psest_1527 at 1630.261 kb on + strand at 1630.388 kb on + strand at 1630.388 kb on + strand at 1630.388 kb on + strand at 1630.389 kb on - strand at 1630.389 kb on - strand at 1630.389 kb on - strand at 1630.389 kb on - strand at 1630.389 kb on - strand at 1630.460 kb on + strand at 1630.460 kb on + strand at 1630.460 kb on + strand at 1630.482 kb on - strand at 1630.532 kb on + strand at 1630.532 kb on + strand at 1630.533 kb on - strand at 1630.560 kb on + strand at 1630.560 kb on + strand at 1630.560 kb on + strand at 1630.560 kb on + strand at 1630.561 kb on - strand at 1630.561 kb on - strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.562 kb on + strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.563 kb on - strand at 1630.661 kb on + strand at 1630.694 kb on + strand at 1630.694 kb on + strand at 1630.694 kb on + strand at 1630.694 kb on + strand at 1630.694 kb on + strand at 1630.694 kb on + strand at 1630.694 kb on + strand at 1630.695 kb on - strand at 1630.695 kb on - strand at 1630.695 kb on - strand at 1630.695 kb on - strand at 1630.696 kb on + strand at 1630.769 kb on + strand at 1630.770 kb on - strand at 1631.128 kb on - strand, within Psest_1528 at 1631.128 kb on - strand, within Psest_1528 at 1631.259 kb on + strand, within Psest_1528 at 1631.260 kb on - strand, within Psest_1528 at 1631.260 kb on - strand, within Psest_1528 at 1631.260 kb on - strand, within Psest_1528 at 1631.327 kb on + strand, within Psest_1528 at 1631.327 kb on + strand, within Psest_1528 at 1631.328 kb on - strand, within Psest_1528 at 1631.455 kb on + strand at 1631.469 kb on + strand at 1631.469 kb on + strand at 1631.470 kb on - strand at 1631.470 kb on - strand at 1631.470 kb on - strand at 1631.542 kb on + strand at 1631.542 kb on + strand at 1631.542 kb on + strand at 1631.542 kb on + strand at 1631.580 kb on + strand at 1631.580 kb on + strand at 1631.580 kb on + strand at 1631.581 kb on - strand at 1631.581 kb on - strand at 1631.581 kb on - strand at 1631.581 kb on - strand at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.846 kb on + strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.847 kb on - strand, within Psest_1529 at 1631.848 kb on + strand, within Psest_1529 at 1631.975 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.014 kb on + strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.015 kb on - strand, within Psest_1529 at 1632.210 kb on - strand, within Psest_1529 at 1632.210 kb on - strand, within Psest_1529 at 1632.306 kb on + strand at 1632.307 kb on - strand at 1632.312 kb on + strand at 1632.325 kb on - strand at 1632.325 kb on - strand at 1632.361 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.421 kb on + strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530 at 1632.422 kb on - strand, within Psest_1530
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 1,629,956 + Psest_1527 0.81 -0.8 1,630,214 + Psest_1527 0.89 -0.6 1,630,214 + Psest_1527 0.89 -1.1 1,630,214 + Psest_1527 0.89 +0.2 1,630,214 + Psest_1527 0.89 -0.1 1,630,214 + Psest_1527 0.89 -0.7 1,630,214 + Psest_1527 0.89 +0.1 1,630,215 - Psest_1527 0.89 -1.1 1,630,215 - Psest_1527 0.89 +0.0 1,630,215 - Psest_1527 0.89 -0.6 1,630,261 + -0.5 1,630,388 + +0.0 1,630,388 + -0.5 1,630,388 + -0.5 1,630,389 - -1.3 1,630,389 - -0.3 1,630,389 - +0.7 1,630,389 - -0.5 1,630,389 - +0.1 1,630,460 + -0.6 1,630,460 + -1.5 1,630,460 + -0.2 1,630,482 - -0.7 1,630,532 + -0.7 1,630,532 + -0.6 1,630,533 - -0.9 1,630,560 + -0.5 1,630,560 + -0.5 1,630,560 + -3.8 1,630,560 + -0.4 1,630,561 - -0.8 1,630,561 - -1.3 1,630,562 + -0.8 1,630,562 + -1.1 1,630,562 + -1.4 1,630,562 + -0.3 1,630,562 + -0.4 1,630,562 + -0.4 1,630,562 + -0.3 1,630,562 + -1.6 1,630,562 + -0.3 1,630,562 + -0.1 1,630,563 - +0.5 1,630,563 - -1.7 1,630,563 - -0.5 1,630,563 - +0.3 1,630,563 - -0.9 1,630,563 - -0.5 1,630,563 - -1.3 1,630,563 - -0.2 1,630,661 + -0.1 1,630,694 + +0.0 1,630,694 + +0.5 1,630,694 + +0.8 1,630,694 + -0.5 1,630,694 + +0.4 1,630,694 + -0.1 1,630,694 + +0.5 1,630,695 - -0.9 1,630,695 - +0.9 1,630,695 - -0.1 1,630,695 - -1.6 1,630,696 + +0.3 1,630,769 + +0.3 1,630,770 - +0.3 1,631,128 - Psest_1528 0.45 -1.0 1,631,128 - Psest_1528 0.45 -0.9 1,631,259 + Psest_1528 0.68 -0.7 1,631,260 - Psest_1528 0.68 -1.2 1,631,260 - Psest_1528 0.68 -0.7 1,631,260 - Psest_1528 0.68 -1.3 1,631,327 + Psest_1528 0.80 -0.8 1,631,327 + Psest_1528 0.80 +0.2 1,631,328 - Psest_1528 0.81 -0.8 1,631,455 + +0.1 1,631,469 + -1.0 1,631,469 + -0.5 1,631,470 - -1.0 1,631,470 - +1.2 1,631,470 - -1.0 1,631,542 + -0.3 1,631,542 + +0.4 1,631,542 + +0.4 1,631,542 + -0.2 1,631,580 + +0.2 1,631,580 + -0.1 1,631,580 + +1.8 1,631,581 - -0.3 1,631,581 - +0.2 1,631,581 - +0.7 1,631,581 - -0.5 1,631,846 + Psest_1529 0.35 -0.3 1,631,846 + Psest_1529 0.35 +0.7 1,631,846 + Psest_1529 0.35 +1.1 1,631,846 + Psest_1529 0.35 -1.2 1,631,846 + Psest_1529 0.35 +0.6 1,631,846 + Psest_1529 0.35 -0.7 1,631,847 - Psest_1529 0.35 -1.5 1,631,847 - Psest_1529 0.35 -0.2 1,631,847 - Psest_1529 0.35 -0.1 1,631,847 - Psest_1529 0.35 +1.2 1,631,847 - Psest_1529 0.35 +0.4 1,631,848 + Psest_1529 0.35 +0.0 1,631,975 + Psest_1529 0.53 -0.2 1,632,014 + Psest_1529 0.59 +0.4 1,632,014 + Psest_1529 0.59 +0.4 1,632,014 + Psest_1529 0.59 -0.9 1,632,014 + Psest_1529 0.59 -0.6 1,632,014 + Psest_1529 0.59 -1.1 1,632,014 + Psest_1529 0.59 +0.9 1,632,014 + Psest_1529 0.59 +0.4 1,632,014 + Psest_1529 0.59 +0.4 1,632,014 + Psest_1529 0.59 -0.6 1,632,014 + Psest_1529 0.59 +0.7 1,632,014 + Psest_1529 0.59 +0.6 1,632,014 + Psest_1529 0.59 -0.6 1,632,014 + Psest_1529 0.59 +0.4 1,632,014 + Psest_1529 0.59 -0.9 1,632,014 + Psest_1529 0.59 +0.8 1,632,014 + Psest_1529 0.59 -0.1 1,632,014 + Psest_1529 0.59 +0.2 1,632,015 - Psest_1529 0.59 +0.3 1,632,015 - Psest_1529 0.59 +0.0 1,632,015 - Psest_1529 0.59 +0.4 1,632,015 - Psest_1529 0.59 +0.1 1,632,015 - Psest_1529 0.59 -0.9 1,632,015 - Psest_1529 0.59 -0.8 1,632,015 - Psest_1529 0.59 +0.6 1,632,015 - Psest_1529 0.59 -1.5 1,632,015 - Psest_1529 0.59 -0.0 1,632,015 - Psest_1529 0.59 -0.1 1,632,015 - Psest_1529 0.59 -0.8 1,632,015 - Psest_1529 0.59 -1.0 1,632,015 - Psest_1529 0.59 +0.9 1,632,015 - Psest_1529 0.59 -0.2 1,632,015 - Psest_1529 0.59 +0.1 1,632,015 - Psest_1529 0.59 -1.1 1,632,015 - Psest_1529 0.59 -0.5 1,632,015 - Psest_1529 0.59 +0.4 1,632,210 - Psest_1529 0.86 -0.2 1,632,210 - Psest_1529 0.86 -0.2 1,632,306 + +0.4 1,632,307 - -0.4 1,632,312 + +0.3 1,632,325 - +0.5 1,632,325 - +0.5 1,632,361 + Psest_1530 0.17 +0.1 1,632,421 + Psest_1530 0.35 +0.3 1,632,421 + Psest_1530 0.35 -0.2 1,632,421 + Psest_1530 0.35 -0.6 1,632,421 + Psest_1530 0.35 -1.6 1,632,422 - Psest_1530 0.35 +0.1 1,632,422 - Psest_1530 0.35 -0.1 1,632,422 - Psest_1530 0.35 -0.5 1,632,422 - Psest_1530 0.35 -0.2 1,632,422 - Psest_1530 0.35 +0.3 1,632,422 - Psest_1530 0.35 +0.2 1,632,422 - Psest_1530 0.35 -0.9 1,632,422 - Psest_1530 0.35 -0.1
Or see this region's nucleotide sequence